Pre_GI: BLASTP Hits

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Query: NC_016445:984856:1005038 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 1005038, End: 1005838, Length: 801

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:2115228:211522821152282116031804Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-150530
NC_002505:1507860:152804015280401528843804Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completebax protein, putative3e-150530
NC_018678:2382708:238335223833522384143792Alteromonas macleodii str. 'English Channel 673' chromosome,mannosyl-glycoprotein endo-beta-N-acetylglucosamidase5e-51201
NC_009092:2282437:230840123084012309273873Shewanella loihica PV-4, complete genomebax protein, putative1e-50199
NC_017192:159047:175027175027175785759Arcobacter sp. L, complete genomehypothetical protein3e-32138
NC_011653:1671910:168641616864161687192777Thermosipho africanus TCF52B, complete genomeBax protein3e-28125
NC_004337:3590323:371792837179283718752825Shigella flexneri 2a str. 301, complete genomeputative ATP-binding protein2e-25116
NC_015380:303215:3221613221613233991239Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomebax protein (hydrolyses peptidoglycan)4e-24111
NC_012039:53497:548135481355520708Campylobacter lari RM2100, complete genomemannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein2e-22106
NC_003454:370418:381821381821382432612Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeBAX protein5e-0755.1