Pre_GI: BLASTP Hits

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Query: NC_015848:2381148:2383470 Mycobacterium canettii CIPT 140010059, complete genome

Start: 2383470, End: 2385440, Length: 1971

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016948:3724390:3738151373815137400821932Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein0751
NC_008595:1413354:1432924143292414345971674Mycobacterium avium 104, complete genomehypothetical protein3e-58226
NC_008595:312861:3227453227453243821638Mycobacterium avium 104, complete genomehypothetical protein1e-43178
NC_002944:292974:3016473016473032691623Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein3e-40167
NC_016948:2033311:2054553205455320560371485Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein5e-35149
NC_014165:2081914:2092291209229120940631773Thermobispora bispora DSM 43833 chromosome, complete genomehypothetical protein3e-30134
NC_015957:1968587:1976550197655019783971848Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein1e-27125
NC_016111:4645145:4659541465954146612621722Streptomyces cattleya NRRL 8057, complete genomehypothetical protein4e-27123
NC_010572:4585500:4610192461019246126992508Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-25117
NC_013947:1296877:1307049130704913087401692Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein2e-25117
NC_013595:6831480:6839768683976868416271860Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-23111
NC_009380:4944183:4956155495615549578251671Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein2e-22108
NC_016111:4207110:4221137422113742229421806Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-21104
NC_013947:5075581:5096398509639850979781581Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein1e-1688.6
NC_014830:1602198:1604109160410916057701662Intrasporangium calvum DSM 43043 chromosome, complete genomeprotein of unknown function DUF10235e-1686.7
NC_013929:7117326:7118260711826071194681209Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-1481.3
NC_021177:2185898:2201991220199122032531263Streptomyces fulvissimus DSM 40593, complete genomeSecreted protein9e-1272.8
NC_018524:4988810:500031550003155001070756Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomealpha/beta hydrolase family protein8e-1066.2
NC_015957:8569721:8588500858850085897051206Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein5e-0963.5
NC_015953:2059083:2075467207546720766781212Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein3e-0860.8
NC_009142:949510:962888962888963541654Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein3e-0654.3
NC_014329:2036812:2072829207282920739201092Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein6e-0653.5
NC_017301:2025978:2063179206317920642731095Corynebacterium pseudotuberculosis C231 chromosome, completehypothetical protein6e-0653.1
NC_014168:1294000:1299430129943013012381809Segniliparus rotundus DSM 44985 chromosome, complete genomehypothetical protein7e-0653.1