Pre_GI: BLASTP Hits

Some Help

Query: NC_015761:2982000:2993131 Salmonella bongori NCTC 12419, complete genome

Start: 2993131, End: 2994129, Length: 999

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011989:2795811:280054228005422801516975Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein7e-1065.1
NC_005126:949226:9504089504089515651158Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-0860.1
NC_005126:949226:9554189554189565751158Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0859.7
NC_014623:4740221:475663947566394757562924Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein3e-0756.2