Pre_GI: BLASTP Hits

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Query: NC_015761:1488807:1498916 Salmonella bongori NCTC 12419, complete genome

Start: 1498916, End: 1500154, Length: 1239

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:1463253:1472365147236514736061242Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative multidrug efflux protein2e-163575
NC_017046:1574057:1578146157814615793871242Salmonella enterica subsp. enterica serovar Typhimurium str. 798multidrug efflux protein2e-163575
NC_016863:1575488:1579577157957715808181242Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative multidrug efflux protein2e-163575
NC_016860:1614280:1619099161909916203401242Salmonella enterica subsp. enterica serovar Typhimurium strputative multidrug efflux protein2e-163575
NC_016857:1576636:1578262157826215795031242Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative multidrug efflux protein2e-163575
NC_016856:1621279:1631386163138616326271242Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative multidrug efflux protein2e-163575
NC_016810:1576636:1578262157826215795031242Salmonella enterica subsp. enterica serovar Typhimurium strputative multidrug efflux protein2e-163575
NC_003197:1611302:1621409162140916226501242Salmonella typhimurium LT2, complete genomeputative multidrug efflux protein2e-163575
NC_011094:1584038:1588857158885715900981242Salmonella enterica subsp. enterica serovar Schwarzengrund strmajor facilitator superfamily protein1e-162572
NC_011149:1578451:1592785159278515940261242Salmonella enterica subsp. enterica serovar Agona str. SL483,major facilitator superfamily MFS_13e-157555
NC_003919:5056650:5075447507544750767121266Xanthomonas axonopodis pv. citri str. 306, complete genometetracycline-efflux transporter6e-1168.9
NC_010410:3606826:3671432367143236726071176Acinetobacter baumannii AYE, complete genomeTetracycline resistance protein, class G (TETA(G))2e-0964.3
NC_005042:1719055:1719055171905517203141260Prochlorococcus marinus subsp. marinus str. CCMP1375, completePermease of the major facilitator superfamily8e-0962
NC_012032:448161:4525394525394537501212Chloroflexus sp. Y-400-fl, complete genomemajor facilitator superfamily MFS_14e-0859.7
NC_005070:2374850:2395742239574223970401299Synechococcus sp. WH 8102, complete genomemultidrug efflux transporter, MFS family2e-0757.4
NC_002932:937157:9410909410909423581269Chlorobium tepidum TLS, complete genomedrug resistance protein, putative1e-0655.1
NC_019977:1621939:1637162163716216384751314Methanomethylovorans hollandica DSM 15978, complete genomearabinose efflux permease family protein5e-0652.8