Pre_GI: BLASTP Hits

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Query: NC_015571:260664:265025 Porphyromonas gingivalis TDC60, complete genome

Start: 265025, End: 265726, Length: 702

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010729:2147268:215294021529402153641702Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein2e-126451
NC_002950:2068500:207396920739692074670702Porphyromonas gingivalis W83, complete genomeCRISPR-associated TM1792 family protein9e-121432
NC_014220:1401065:140863014086301409478849Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeCRISPR-associated RAMP protein, Cmr4 family6e-29127
NC_013526:65495:698696986970765897Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated RAMP protein, Cmr4 family1e-0963.2
NC_012622:681472:687801687801688661861Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeCmr4 family CRISPR-associated RAMP protein3e-0755.5
NC_016645:743792:746852746852747724873Pyrobaculum sp. 1860 chromosome, complete genomeCmr4 family CRISPR-associated RAMP protein4e-0755.1
NC_017276:559971:582794582794583654861Sulfolobus islandicus REY15A chromosome, complete genomeCmr4 family CRISPR-associated RAMP protein6e-0754.7