Pre_GI: BLASTP Hits

Some Help

Query: NC_015416:2113949:2134838 Methanosaeta concilii GP-6 chromosome, complete genome

Start: 2134838, End: 2135245, Length: 408

Host Lineage: Methanosaeta concilii; Methanosaeta; Methanosaetaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: Methanosaeta, the predominant methane producer on earth, has received little attention in recent years due to its slow growth and difficulties in culturing. Therefore, the genome sequence is a valuable source of information about this microbe and offers the most tractable approach to understanding its physiology. Furthermore, the genome sequence of Methanosaeta concilii GP-6 significantly increases our knowledge of the role of acetate-utilizing methanoarchaea in the global carbon cycle, and also allows for a more complete comparative genomics analysis of methanogenic archaea as now both genera of aceticlastic methanoarchaea are now represented.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000909:467607:485578485578486003426Methanocaldococcus jannaschii DSM 2661, complete genomenickel responsive regulator5e-37152
NC_013156:728397:748013748013748438426Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family5e-36149
NC_007355:2838952:285914428591442859569426Methanosarcina barkeri str. fusaro chromosome 1, complete sequencetranscriptional regulator, CopG family6e-36149
NC_003552:2133590:215101021510102151447438Methanosarcina acetivorans C2A, complete genometranscriptional regulator, CopG family5e-35146
NC_015680:369777:385309385309385725417Pyrococcus yayanosii CH1 chromosome, complete genometranscription nickel responsive regulator (nikR)1e-31135
NC_000868:1386592:139771213977121398128417Pyrococcus abyssi GE5, complete genomenickel responsive regulator2e-28124
NC_011146:4070000:407565140756514076070420Geobacter bemidjiensis Bem, complete genomeputative transcriptional regulator, CopG family1e-27121
NC_019942:987134:103530410353041035708405Aciduliprofundum sp. MAR08-339, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain2e-25114
NC_019978:315346:320567320567320980414Halobacteroides halobius DSM 5150, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain3e-23107
NC_019940:3089884:310346431034643103886423Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator4e-23106
NC_004917:340997:341634341634342065432Helicobacter hepaticus ATCC 51449, complete genomenickel responsive regulator1e-22105
NC_008340:2272692:228003322800332280452420Alkalilimnicola ehrlichei MLHE-1, complete genomeputative transcriptional regulator, CopG family2e-21100
NC_008212:2978786:299626729962672996806540Haloquadratum walsbyi DSM 16790, complete genometranscription regulator; probably nickel responsive regulator5e-2199.8
NC_006396:2025500:203044520304452030855411Haloarcula marismortui ATCC 43049 chromosome I, complete sequencetranscriptional regulator CopG family5e-2199.8
NC_012912:242709:263936263936264355420Dickeya zeae Ech1591, complete genometranscriptional regulator NikR, CopG family5e-1993.2
NC_013508:275081:292753292753293199447Edwardsiella tarda EIB202, complete genomenickel responsive regulator7e-1889.4
NC_012779:261438:275788275788276225438Edwardsiella ictaluri 93-146, complete genomenickel-responsive transcriptional regulator NikR, putative1e-1685.1
NC_020388:1582817:158833215883321588721390Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator2e-1684.7
NC_013959:83992:101591101591102100510Sideroxydans lithotrophicus ES-1 chromosome, complete genometranscriptional regulator NikR, CopG family3e-1683.6
NC_020388:1582817:158544315854431585907465Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator1e-1375.1
NC_013964:161105:169317169317169745429Haloferax volcanii DS2 plasmid pHV3, complete sequenceRibbon-helix-helix protein, copG family domain protein3e-1373.6
NC_004741:4160500:418449041844904184891402Shigella flexneri 2a str. 2457T, complete genomenickel responsive regulator6e-1372.8
NC_019974:2421422:243945524394552439892438Natronococcus occultus SP4, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain2e-1271.2
NC_019962:1875952:189258418925841892991408Natrinema pellirubrum DSM 15624, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain3e-1270.9
NC_006396:1097000:110280211028021103221420Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceputative nickel responsive regulator3e-1270.5
NC_014729:1908086:191297319129731913380408Halogeometricum borinquense DSM 11551 chromosome, complete genometranscriptional regulator with copg/arc/metj DNA-binding domain and metal-binding domain3e-1167
NC_020388:1582817:159309715930971593525429Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator4e-1167
NC_020388:1428042:143786614378661438255390Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator7e-1165.9
NC_013887:1383127:138587513858751386282408Methanocaldococcus sp. FS406-22 chromosome, complete genomeputative transcriptional regulator, CopG family5e-1063.2
NC_016070:167362:187502187502187894393Thermoproteus tenax Kra 1, complete genomeCopG/MetJ family transcriptional regulator5e-1063.2
NC_013887:407771:419348419348419731384Methanocaldococcus sp. FS406-22 chromosome, complete genometranscriptional regulator NikR, CopG family9e-1062.4
NC_009635:985935:997499997499997906408Methanococcus aeolicus Nankai-3 chromosome, complete genomeCopG family transcriptional regulator1e-0962
NC_007520:1940120:196002519600251960498474Thiomicrospira crunogena XCL-2, complete genomeputative transcriptional regulator, CopG family3e-0960.8
NC_008701:168662:184589184589184987399Pyrobaculum islandicum DSM 4184, complete genomeputative transcriptional regulator, CopG family4e-0960.1
NC_000909:67729:737997379974182384Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein6e-0959.7
NC_010510:310938:327484327484327945462Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeputative transcriptional regulator, CopG family2e-0754.7
NC_015562:436128:451651451651452046396Methanotorris igneus Kol 5 chromosome, complete genometranscriptional regulator NikR5e-0753.1
NC_013156:381910:396265396265396645381Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family6e-0752.8
NC_014820:1087153:110315611031561103551396Cenarchaeum symbiosum A, complete genometranscriptional regulator6e-0752.8