Pre_GI: BLASTP Hits

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Query: NC_015410:2258800:2270898 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 2270898, End: 2273090, Length: 2193

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012559:1497548:1508696150869615108372142Laribacter hongkongensis HLHK9, complete genomeSuperfamily II helicase2e-49197
NC_007519:791679:8025588025588046572100Desulfovibrio alaskensis G20 chromosome, complete genomehelicase-like2e-45184
NC_011283:1811000:1824430182443018266282199Klebsiella pneumoniae 342 chromosome, complete genomehelicase1e-42175
NC_008321:3964414:3973198397319839753512154Shewanella sp. MR-4, complete genomeDEAD/DEAH box helicase domain protein4e-38160
AC_000091:2747520:2760007276000727621962190Escherichia coli W3110 DNA, complete genomehypothetical protein2e-35150
NC_010473:2839902:2851138285113828533272190Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; conserved protein2e-35150
NC_000913:2746886:2759373275937327615622190Escherichia coli K12, complete genomeCP4-57 prophage; conserved protein2e-35150
NC_012759:2633949:2645185264518526473742190Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage protein2e-35150
NC_009049:2131017:2148890214889021510252136Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencehelicase domain protein2e-33144
NC_012214:1650523:1661327166132716634592133Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein1e-31138
NC_015948:2367000:2374592237459223771982607Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeDEAD/DEAH box helicase domain-containing protein5e-30133
NC_009720:216589:2336772336772357882112Xanthobacter autotrophicus Py2, complete genomehypothetical protein2e-28128
NC_014393:2868846:2868846286884628713472502Clostridium cellulovorans 743B chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein2e-27124
NC_021184:3149000:3154397315439731564692073Desulfotomaculum gibsoniae DSM 7213, complete genomesuperfamily II helicase2e-25118
NC_008800:2806827:2848733284873328504961764Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-25117
NC_016584:954000:9723979723979749432547Desulfosporosinus orientis DSM 765 chromosome, complete genomesuperfamily II helicase1e-22108
NC_015633:1702000:1719470171947017219952526Vibrio anguillarum 775 chromosome chromosome I, complete sequenceATP-dependent DNA helicase2e-22108
NC_013521:2193203:2201802220180222043602559Sanguibacter keddieii DSM 10542, complete genomesuperfamily II helicase1e-21105
NC_011080:4703266:4711108471110847136572550Salmonella enterica subsp. enterica serovar Newport str. SL254,putative dead/deah box helicase domain protein4e-21103
NC_014623:9038177:9042672904267290452992628Stigmatella aurantiaca DW4/3-1 chromosome, complete genomedead/deah box helicase domain-containing protein8e-21102
NC_010334:1701957:1712142171214217146552514Shewanella halifaxensis HAW-EB4, complete genomehelicase domain protein1e-1998.6
NC_020209:4312892:4319205431920543218352631Pseudomonas poae RE*1-1-14, complete genomedead/deah box helicase domain-containing protein2e-1998.2
NC_014500:443874:4534484534484560242577Dickeya dadantii 3937 chromosome, complete genomehelicase conserved C-terminal domain-containing protein2e-1894.7
NC_008782:2568027:2579272257927225818422571Acidovorax sp. JS42, complete genomeDEAD/DEAH box helicase domain protein3e-1894
NC_014828:1932971:1944957194495719476892733Ethanoligenens harbinense YUAN-3 chromosome, complete genomehelicase domain protein2e-1791.7
NC_014323:5051041:5059892505989250624652574Herbaspirillum seropedicae SmR1 chromosome, complete genomeDNA helicase3e-1790.9
NC_000868:834872:8474058474058495522148Pyrococcus abyssi GE5, complete genomeski2-like helicase7e-1583.2
NC_009050:427000:4364524364524390582607Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDEAD/DEAH box helicase domain protein1e-1482
NC_015697:506494:5064945064945091062613Lactobacillus reuteri SD2112 chromosome, complete genomehypothetical protein3e-1481.3
NC_012588:211633:2155952155952177422148Sulfolobus islandicus M.14.25 chromosome, complete genomeDEAD/DEAH box helicase2e-1481.3
NC_014623:4683671:4708241470824147097761536Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDNA/RNA helicase1e-1379.3
NC_009434:695582:7097267097267121912466Pseudomonas stutzeri A1501, complete genomehypothetical protein1e-1275.5
NC_015680:663341:6893096893096914472139Pyrococcus yayanosii CH1 chromosome, complete genomeski2-like helicase1e-1275.5
NC_016612:5296076:5309195530919553116512457Klebsiella oxytoca KCTC 1686 chromosome, complete genomeDNA helicase-like protein2e-1275.5
NC_010995:4525119:4539346453934645425793234Cellvibrio japonicus Ueda107, complete genomeDEAD/DEAH box helicase3e-1171.2
NC_008698:435885:4504834504834527022220Thermofilum pendens Hrk 5, complete genomeDEAD/DEAH box helicase domain protein4e-1170.5
NC_011751:3048490:3061039306103930623221284Escherichia coli UMN026 chromosome, complete genomeputative Signal transduction histidine kinase6e-1170.1
NC_015312:1265797:1328324132832413318363513Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein3e-1067.8
NC_002578:877609:8969148969148989382025Thermoplasma acidophilum DSM 1728, complete genomeski2-like helicase3e-1067.8
NC_012912:1701231:1710394171039417126702277Dickeya zeae Ech1591, complete genomehelicase domain protein3e-1067.4
NC_014253:142026:1803571803571825582202Methanohalobium evestigatum Z-7303 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein4e-1067.4
NC_009848:3631243:3638676363867636411232448Bacillus pumilus SAFR-032, complete genomeDNA helicase9e-1066.2
NC_019973:6102442:6107832610783261113503519Mesorhizobium australicum WSM2073, complete genomesuperfamily II helicase1e-0965.5
NC_010334:2615260:2629510262951026317862277Shewanella halifaxensis HAW-EB4, complete genomehelicase domain protein3e-0964.7
NC_016943:1422926:1437021143702114389431923Blastococcus saxobsidens DD2, complete genomeputative helicase1e-0862
NC_015977:3011177:3022825302282530260643240Roseburia hominis A2-183 chromosome, complete genomehypothetical protein2e-0861.6
NC_007951:2904644:2929804292980429324522649Burkholderia xenovorans LB400 chromosome 1, complete sequenceHelicase-like protein4e-0860.5
NC_015757:2459424:2465204246520424682273024Sulfobacillus acidophilus TPY chromosome, complete genomeSKI2-family helicase8e-0859.7
NC_020829:2754203:2764299276429927672832985Pseudomonas denitrificans ATCC 13867, complete genomeDEAD/DEAH box helicase1e-0759.3
NC_016884:1201868:1210037121003712130603024Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeDEAD/DEAH box helicase1e-0758.9
NC_014297:1:2182621826241622337Halalkalicoccus jeotgali B3 chromosome, complete genomeDEAD/DEAH box helicase domain protein2e-0758.5
NC_011751:3048490:3059798305979830610001203Escherichia coli UMN026 chromosome, complete genomeputative ERCC4-like helicase5e-0757
NC_008701:1039304:1040055104005510421752121Pyrobaculum islandicum DSM 4184, complete genomeDEAD/DEAH box helicase domain protein7e-0756.6
NC_013887:17160:3427134271363582088Methanocaldococcus sp. FS406-22 chromosome, complete genomeDEAD/DEAH box helicase domain protein1e-0655.8
NC_019892:7822000:7873013787301378752892277Singulisphaera acidiphila DSM 18658 chromosome, complete genomesuperfamily II RNA helicase2e-0655.5
NC_008095:5527707:5540692554069255442523561Myxococcus xanthus DK 1622, complete genomeATP-dependent helicase, DEAD/DEAH box family2e-0655.1
NC_013093:2471574:2494410249441024974002991Actinosynnema mirum DSM 43827, complete genomeDEAD/DEAH box helicase domain protein2e-0654.7
NC_014961:445717:4477564477564499002145Desulfurococcus mucosus DSM 2162 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein5e-0653.5
NC_015500:2866027:2874262287426228773483087Treponema brennaborense DSM 12168 chromosome, complete genomeDEAD/DEAH box helicase domain protein7e-0653.1