Pre_GI: BLASTP Hits

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Query: NC_015312:5579078:5594738 Pseudonocardia dioxanivorans CB1190 chromosome, complete genome

Start: 5594738, End: 5594917, Length: 180

Host Lineage: Pseudonocardia dioxanivorans; Pseudonocardia; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Country: USA; Environment: Sludge, Fresh water; Isolation: Industrial sludge contaminated; Temp: Mesophile; Temp: 30C. Pseudonocardia members are abundant in diverse environments, and are known to degrade a variety of pollutants. These bacteria are also important in biocatalysis applications and in the production of antibiotics. Pseudonocardia dioxanivorans was first isolated from 1,4-dioxane containing sludge. This organism is able to grow using 1,4-dioxane, a toxic compound used as an industrial solvent, as the sole carbon source.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015434:6020178:604229960422996042493195Verrucosispora maris AB-18-032 chromosome, complete genomeexcisionase/Xis, DNA-binding protein2e-1581.3
NC_014830:3275474:328174532817453281930186Intrasporangium calvum DSM 43043 chromosome, complete genomeexcisionase/Xis, DNA-binding protein2e-1477.8
NC_014391:6000834:601643860164386016626189Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeexcisionase/Xis, DNA-binding4e-1476.6
NC_015434:5411:541154115596186Verrucosispora maris AB-18-032 chromosome, complete genomeexcisionase/Xis, DNA-binding protein2e-1271.2
NC_019673:1275627:129574112957411295932192Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein6e-1269.3
NC_013093:1411882:142905614290561429235180Actinosynnema mirum DSM 43827, complete genomeregulatory protein MerR2e-1167.8
NC_013093:7437033:745541474554147455593180Actinosynnema mirum DSM 43827, complete genomehypothetical protein3e-1167.4
NC_013093:1213908:123677212367721236951180Actinosynnema mirum DSM 43827, complete genome5e-1166.6
NC_009921:1736000:173925217392521739521270Frankia sp. EAN1pec, complete genomeexcision promoter, Xis6e-1166.2
NC_018750:2118907:214178821417882142009222Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-1065.1
NC_013929:5952380:595565659556565955928273Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein2e-1064.7
NC_014210:723719:739842739842740018177Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,excisionase/Xis, DNA-binding protein2e-1064.7
NC_014666:1601972:160661316066131606810198Frankia sp. EuI1c chromosome, complete genomeDNA binding domain protein, excisionase family5e-1063.2
NC_013729:2157785:217946621794662179663198Kribbella flavida DSM 17836, complete genomeregulatory protein MerR7e-1062.8
NC_017186:6539181:655819765581976558409213Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein8e-1062.4
NC_014318:6539137:655815365581536558365213Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein8e-1062.4
NC_018750:3249756:326138232613823261720339Streptomyces venezuelae ATCC 10712, complete genomeexcisionase or Xis_1e-0962
NC_007777:4016000:403222740322274032430204Frankia sp. CcI3, complete genomeExcisionase/Xis, DNA-binding2e-0960.8
NC_014211:439611:455740455740455949210Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidhypothetical protein3e-0857.4
NC_003155:4906639:490795549079554908194240Streptomyces avermitilis MA-4680, complete genomehypothetical protein4e-0857
NC_014666:6940532:694978369497836949980198Frankia sp. EuI1c chromosome, complete genomeProphage CP4-57 regulatory4e-0856.6
NC_008699:2418722:244470624447062444981276Nocardioides sp. JS614, complete genomehypothetical protein6e-0856.2
NC_016109:3591401:362507936250793625291213Kitasatospora setae KM-6054, complete genomehypothetical protein2e-0754.7
NC_014215:1243125:124292912429291243144216Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,hypothetical protein9e-0752.4