Pre_GI: BLASTP Hits

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Query: NC_014834:614890:620428 Rhodopseudomonas palustris DX-1 chromosome, complete genome

Start: 620428, End: 621462, Length: 1035

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Environment: Fresh water, Soil; Temp: Mesophile. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:2109843:2115945211594521169791035Bradyrhizobium japonicum USDA 6, complete genomeconjugal transfer protein2e-173608
NC_004463:1772541:177567917756791776635957Bradyrhizobium japonicum USDA 110, complete genomeconjugal transfer protein1e-161568
NC_014834:959986:983230983230984213984Rhodopseudomonas palustris DX-1 chromosome, complete genomeP-type conjugative transfer protein TrbG6e-105380
NC_009485:8138314:814042581404258141321897Bradyrhizobium sp. BTAi1 chromosome, complete genomeconjugal transfer protein TrbG1e-100366
NC_009668:529175:5407885407885418161029Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceP-type conjugative transfer protein TrbG2e-99362
NC_008254:534590:555402555402556382981Mesorhizobium sp. BNC1, complete genomeConjugal transfer protein TrbG/VirB9/CagX1e-97357
NC_009720:750612:7811697811697821851017Xanthobacter autotrophicus Py2, complete genomeP-type conjugative transfer protein TrbG1e-95350
NC_014834:3472000:349982334998233500821999Rhodopseudomonas palustris DX-1 chromosome, complete genomeP-type conjugative transfer protein TrbG7e-92337
NC_009720:813157:8285818285818296061026Xanthobacter autotrophicus Py2, complete genomeP-type conjugative transfer protein TrbG1e-91336
NC_010725:3315007:3318188331818833192551068Methylobacterium populi BJ001, complete genomeP-type conjugative transfer protein TrbG2e-91336
NC_010338:4148667:4154340415434041553651026Caulobacter sp. K31, complete genomeP-type conjugative transfer protein TrbG2e-91335
NC_009720:3210387:3211067321106732120921026Xanthobacter autotrophicus Py2, complete genomeP-type conjugative transfer protein TrbG3e-91335
NC_010125:1011430:102674910267491027735987Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein trbG1e-90333
NC_007925:3911323:3926570392657039276101041Rhodopseudomonas palustris BisB18, complete genomeConjugal transfer protein TrbG/VirB9/CagX8e-89327
NC_009720:3317642:3334460333446033355031044Xanthobacter autotrophicus Py2, complete genomeP-type conjugative transfer protein TrbG2e-88325
NC_009720:4406991:4421121442112144221731053Xanthobacter autotrophicus Py2, complete genomeP-type conjugative transfer protein TrbG2e-87322
NC_009720:670853:6761866761866772381053Xanthobacter autotrophicus Py2, complete genomeP-type conjugative transfer protein TrbG1e-86320
NC_010125:2813653:2830891283089128318921002Gluconacetobacter diazotrophicus PAl 5, complete genomeputative type IV secretion system8e-81300
NC_015410:3209954:321276032127603213746987Pseudomonas mendocina NK-01 chromosome, complete genomeP-type conjugative transfer protein TrbG7e-73274
NC_018691:3082000:310550831055083106497990Alcanivorax dieselolei B5 chromosome, complete genomeTrbG-like protein4e-71268
NC_010002:2933909:2960330296033029613311002Delftia acidovorans SPH-1, complete genomeP-type conjugative transfer protein TrbG1e-67256
NC_015186:491930:493932493932494912981Acidiphilium multivorum AIU301, complete genomeP-type conjugative transfer protein TrbG2e-67256
NC_010170:4800000:488646948864694887434966Bordetella petrii, complete genomeconjugal transfer protein TrbG3e-67255
NC_008757:77023:7911079110801231014Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeConjugal transfer protein TrbG/VirB9/CagX1e-66253
NC_008577:1489643:150088215008821501874993Shewanella sp. ANA-3 chromosome 1, complete sequenceConjugal transfer protein TrbG/VirB9/CagX1e-66253
NC_011992:1381843:138394813839481384937990Acidovorax ebreus TPSY, complete genomeP-type conjugative transfer protein TrbG1e-66253
NC_015381:2859000:287319428731942874192999Burkholderia gladioli BSR3 chromosome 1, complete sequenceP-type conjugative transfer protein TrbG2e-65249
NC_009656:3817261:383390138339013834893993Pseudomonas aeruginosa PA7 chromosome, complete genomeconjugal transfer protein TrbG/VirB9/CagX4e-65248
NC_015422:1643000:165888916588891659872984Alicycliphilus denitrificans K601 chromosome, complete genomeP-type conjugative transfer protein TrbG2e-64246
NC_015593:2914384:291657229165722917555984Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeP-type conjugative transfer protein TrbG3e-64245
NC_014414:2569494:2568490256849025694971008Parvularcula bermudensis HTCC2503 chromosome, complete genomeconjugal transfer protein TrbG5e-61234
NC_015186:2839668:285655628565562857539984Acidiphilium multivorum AIU301, complete genomeconjugal transfer protein TrbG7e-60231
NC_014006:2932959:295309029530902953947858Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TrbG4e-57222
NC_014500:894136:899163899163900098936Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbG2e-55216
NC_012912:1295653:131650213165021317383882Dickeya zeae Ech1591, complete genomeP-type conjugative transfer protein TrbG3e-55216
NC_013209:2582878:259083425908342591367534Acetobacter pasteurianus IFO 3283-01, complete genomeconjugal transfer protein TrbG3e-32139
NC_011666:1601983:1603188160318816042261039Methylocella silvestris BL2, complete genome4e-31135
NC_013422:1755875:1792655179265517936711017Halothiobacillus neapolitanus c2, complete genomeP-type conjugative transfer protein TrbG1e-29130
NC_008254:611437:614177614177614419243Mesorhizobium sp. BNC1, complete genome4e-27122
NC_006371:1743982:175494117549411755813873Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical TrbG protein3e-26119
NC_013861:3341955:336314233631423364017876Legionella longbeachae NSW150, complete genomeConjugal transfer protein trbG precursor2e-23110
NC_015385:1875671:1895462189546218965501089Treponema succinifaciens DSM 2489 chromosome, complete genomeConjugal transfer protein TrbG/VirB9/CagX1e-21103
NC_015386:107000:1176141176141186931080Treponema succinifaciens DSM 2489 plasmid pTRESU01, completeConjugal transfer protein TrbG/VirB9/CagX4e-2099
NC_012751:409333:420074420074420874801Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeVirB9 conjugative transfer protein1e-1481.3
NC_015850:2048251:208620820862082087026819Acidithiobacillus caldus SM-1 chromosome, complete genomeconjugal transfer protein TrbG/VirB9/CagX4e-1479
NC_008781:2611702:264637926463792647161783Polaromonas naphthalenivorans CJ2, complete genomeConjugal transfer protein TrbG/VirB9/CagX5e-1479
NC_016814:18000:369563695637765810Sinorhizobium fredii HH103 plasmid pSfHH103c complete sequenceType IV secretion system protein virB9 Flags: Precursor1e-1274.3
NC_010170:3908500:392261839226183923505888Bordetella petrii, complete genometype IV secretion system protein VirB92e-1170.5
NC_007950:206474:209012209012209818807Polaromonas sp. JS666 plasmid 2, complete sequenceConjugal transfer protein TrbG/VirB9/CagX2e-1170.1
NC_008786:4070753:408793540879354088753819Verminephrobacter eiseniae EF01-2, complete genomeConjugal transfer protein TrbG/VirB9/CagX9e-1168.2
NC_007354:1087456:110492211049221105734813Ehrlichia canis str. Jake, complete genomeConjugal transfer protein TrbG/VirB9/CagX4e-1065.9
NC_009488:327285:332462332462333223762Orientia tsutsugamushi str. Boryong, complete genomeconjugal transfer protein1e-0964.7
NC_010515:1124298:113167011316701132494825Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceConjugal transfer protein TrbG/VirB9/CagX1e-0964.3
NC_007799:186000:206250206250207062813Ehrlichia chaffeensis str. Arkansas, complete genometype IV secretion system protein, VirB92e-0963.9
NC_008061:2106848:211422021142202115044825Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceConjugal transfer protein TrbG/VirB9/CagX9e-0961.6
NC_011001:372185:386255386255387079825Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB91e-0860.8
NC_008757:111292:111292111292112134843Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeConjugal transfer protein TrbG/VirB9/CagX1e-0860.8
NC_009254:365812:371054371054371878825Burkholderia vietnamiensis G4 chromosome 3, complete sequenceconjugal transfer protein TrbG/VirB9/CagX1e-0757.4
NC_016929:825413:844094844094844846753Rickettsia canadensis str. CA410 chromosome, complete genomehypothetical protein2e-0757.4
NC_009879:835227:853981853981854733753Rickettsia canadensis str. McKiel, complete genomehypothetical protein6e-0755.5
NC_017271:2935643:297066429706642971437774Xanthomonas campestris pv. raphani 756C chromosome, completetype IV secretion system protein VirB91e-0654.3