Pre_GI: BLASTP Hits

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Query: NC_014666:4419693:4438717 Frankia sp. EuI1c chromosome, complete genome

Start: 4438717, End: 4440012, Length: 1296

Host Lineage: Frankia; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Host, Plant symbiont, Soil; Temp: Mesophile. Frankia sp. EuI1c was isolated from the Autumn olive, Elaeagnus umbellata. Frankia sp. (strain EuI1c) is an aerobic Gram-positive bacterium isolated from four continents (North America, South America, Africa, and Asia) and different habitats, including dry soils with high salinity levels, steppe-like plains at 900 m, and mountain forests at 3,000 m.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016935:4038265:405515440551544056110957Paenibacillus mucilaginosus 3016 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit5e-49195
NC_013510:4319296:433794943379494338947999Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-46186
NC_012914:5225609:523278752327875233743957Paenibacillus sp. JDR-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-42174
NC_015690:3477573:349535034953503496201852Paenibacillus mucilaginosus KNP414 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit6e-41168
NC_016109:327826:348659348659349585927Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor5e-35149
NC_013131:3473843:3473843347384334748471005Catenulispora acidiphila DSM 44928, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-34147
NC_014666:5449884:545245454524545453449996Frankia sp. EuI1c chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-33144
NC_017186:6817904:683778768377876838761975Amycolatopsis mediterranei S699 chromosome, complete genomeRNA polymerase factor sigma-708e-31135
NC_014318:6817860:683774368377436838723981Amycolatopsis mediterranei U32 chromosome, complete genomeRNA polymerase sigma-70 factor, ECF subfamily4e-31135
NC_014815:5888934:589354558935455894543999Micromonospora sp. L5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily2e-30134
NC_013169:513327:539599539599540546948Kytococcus sedentarius DSM 20547, complete genomeRNA polymerase sigma-70 factor, TIGR02960 family2e-24113
NC_009953:3316782:3328358332835833294311074Salinispora arenicola CNS-205 chromosome, complete genomeRNA polymerase factor sigma-703e-24113
NC_013947:3785332:381242738124273813008582Stackebrandtia nassauensis DSM 44728 chromosome, complete genome9e-2098.2
NC_003155:5253923:527524952752495275962714Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma-70 factor1e-1274.7
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-1171.2
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor2e-1170.9
NC_003888:4251867:428257742825774283287711Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma-70 factor7e-1168.9
NC_013929:5135285:515159451515945152304711Streptomyces scabiei 87.22 chromosome, complete genomesigma factor7e-1168.9
NC_015953:3684065:370288037028803703584705Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1068.2
NC_016114:3655005:367332236733223674023702Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1068.2
NC_020272:3706722:372792437279243728487564Bacillus amyloliquefaciens IT-45, complete genomeRNA polymerase sigma factor SigW2e-1067.8
NC_020410:198000:198744198744199307564Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase ECF(Extracytoplasmic function)-type sigma factor W2e-1067.8
NC_014551:199500:199660199660200223564Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor W2e-1067.8
NC_017188:177500:177639177639178202564Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigW2e-1067.8
NC_017190:182449:182449182449183012564Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma factor2e-1067.8
NC_017191:183500:183549183549184112564Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigW2e-1067.8
NC_018750:3964784:398322139832213983961741Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor4e-1066.2
NC_010320:671699:672453672453672983531Thermoanaerobacter sp. X514 chromosome, complete genomeRNA polymerase sigma factor SigY2e-0964.3
NC_011567:139598:151917151917152480564Anoxybacillus flavithermus WK1, complete genomeDNA-directed RNA polymerase specialized sigma subunit5e-0962.8
NC_014210:5752651:575645957564595757085627Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,RNA polymerase, sigma-24 subunit, ECF subfamily7e-0962.4
NC_007333:3626510:363293636329363633556621Thermobifida fusca YX, complete genomeRNA polymerase sigma-70 factor6e-0962.4
NC_012660:1579204:161309716130971613678582Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor AlgU7e-0962
NC_014829:259707:280208280208280738531Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0861.6
NC_013929:9038500:903995490399549040901948Streptomyces scabiei 87.22 chromosome, complete genomesigma factor2e-0860.5
NC_010995:2547164:254810525481052548695591Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma-H factor (Sigma-30)4e-0859.7
NC_012880:3241886:326005132600513260626576Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0859.7
NC_008435:854576:876605876605877288684Rhodopseudomonas palustris BisA53, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0859.3
NC_014483:4740214:475311047531104753685576Paenibacillus polymyxa E681 chromosome, complete genomeDNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein1e-0758.5
NC_012214:1117325:114286111428611143436576Erwinia pyrifoliae Ep1/96, complete genomeRNA polymerase sigma E9e-0858.5
NC_009921:4757148:477616347761634776723561Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0758.2
NC_017904:2641270:266192226619222662830909Mycobacterium sp. MOTT36Y chromosome, complete genomeECF family RNA polymerase sigma factor1e-0757.8
NC_015172:1075592:107559210755921076101510Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0757.8
NC_008554:1623041:164580616458061646414609Syntrophobacter fumaroxidans MPOB, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0757.4
NC_016609:4834378:488406148840614884942882Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-0757.4
NC_009142:6199326:620408662040866204679594Saccharopolyspora erythraea NRRL 2338, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0757
NC_015673:464630:467907467907468443537Corynebacterium resistens DSM 45100 chromosome, complete genomeECF-family sigma factor W4e-0756.6
NC_002696:2941644:296405329640532964613561Caulobacter crescentus CB15, complete genomeRNA polymerase sigma-70 factor3e-0756.6
NC_011916:2967624:299003329900332990593561Caulobacter crescentus NA1000 chromosome, complete genomeRNA polymerase sigma factor3e-0756.6
NC_012560:2315350:232811423281142328680567Azotobacter vinelandii DJ, complete genomeRNA polymerase sigma-70 factor5e-0756.2
NC_021150:2315362:232812623281262328692567Azotobacter vinelandii CA6, complete genomeRNA polymerase sigma factor SigX5e-0756.2
NC_012673:1540000:154720815472081547783576Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0755.8
NC_016109:3963189:396631339663133967236924Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor1e-0655.1
NC_016641:5926000:592727759272775928050774Paenibacillus terrae HPL-003 chromosome, complete genomeDNA-directed RNA polymerase subunit sigma1e-0654.7
NC_003450:788000:804408804408805028621Corynebacterium glutamicum ATCC 13032, complete genomeRNA polymerase sigma factor RpoE2e-0653.9
NC_009342:951761:964659964659965279621Corynebacterium glutamicum R chromosome, complete genomeRNA polymerase sigma factor RpoE2e-0653.9
NC_017955:3731480:383478738347873835308522Modestobacter marinus, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0653.5
NC_014923:79370:919919199192533543Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeRNA polymerase sigma factor, sigma-70 family3e-0653.5
NC_020126:2216926:223261622326162233497882Myxococcus stipitatus DSM 14675, complete genomeECF family RNA polymerase sigma factor5e-0652.8
NC_015312:1191633:120925612092561210143888Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit5e-0652.8
NC_011891:4450031:447536544753654476306942Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0652.4