Pre_GI: BLASTP Hits

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Query: NC_014355:1223243:1225064 Candidatus Nitrospira defluvii, complete genome

Start: 1225064, End: 1225558, Length: 495

Host Lineage: Nitrospira defluvii; Nitrospira; Nitrospiraceae; Nitrospirales; Nitrospirae; Bacteria

General Information: This nitrite-oxidizing bacterium was found through enrichment from activated sludge from a municipal wastewater treatment plant. Phylogenetic analysis of 16S rRNA gene sequences revealed that the enriched bacteria represented a novel Nitrospira species closely related to uncultured Nitrospira-like bacteria previously found in wastewater treatment plants and nitrifying bioreactors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002939:2617037:2634831263483126378783048Geobacter sulfurreducens PCA, complete genomesensory box histidine kinase/response regulator7e-1683.2
NC_011146:482440:5050885050885079552868Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase6e-1373.2
NC_008609:1976403:2056927205692720599112985Pelobacter propionicus DSM 2379, complete genomemulti-sensor hybrid histidine kinase2e-1168.2
NC_011027:817311:8281228281228305182397Chlorobaculum parvum NCIB 8327, complete genomemulti-sensor hybrid histidine kinase3e-1167.8
NC_020304:1097478:1111644111164411139682325Desulfocapsa sulfexigens DSM 10523, complete genomePAS domain S-box7e-1166.6
NC_015672:788417:8056028056028075241923Flexistipes sinusarabici DSM 4947 chromosome, complete genomemulti-sensor hybrid histidine kinase1e-1065.9
NC_011146:2485625:2485625248562524894073783Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase1e-1065.5
NC_013223:1349000:1352416135241613546922277Desulfohalobium retbaense DSM 5692, complete genomePAS/PAC sensor hybrid histidine kinase2e-1064.7
NC_012108:4417483:4431023443102344335002478Desulfobacterium autotrophicum HRM2, complete genometwo-component sensory box histidine kinase/response regulator3e-1064.3
NC_013223:1090397:1100795110079511030052211Desulfohalobium retbaense DSM 5692, complete genomePAS/PAC sensor hybrid histidine kinase1e-0962.4
NC_008536:8541267:855800685580068558437432Solibacter usitatus Ellin6076, complete genomeresponse regulator receiver protein1e-0962
NC_010725:4035397:4040090404009040425132424Methylobacterium populi BJ001, complete genomemulti-sensor hybrid histidine kinase5e-0960.5
NC_011757:5742290:5768649576864957713212673Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase1e-0858.9
NC_004463:2344128:2350024235002423519281905Bradyrhizobium japonicum USDA 110, complete genometwo-component hybrid sensor and regulator1e-0858.9
NC_017249:7917586:7930165793016579321591995Bradyrhizobium japonicum USDA 6, complete genometwo-component hybrid sensor and regulator1e-0858.9
NC_012918:1814000:183116018311601831861702Geobacter sp. M21 chromosome, complete genomeXRE family transcriptional regulator2e-0858.5
NC_020304:129321:1457451457451478982154Desulfocapsa sulfexigens DSM 10523, complete genomePAS domain S-box2e-0858.2
NC_017030:4062699:408216040821604082516357Corallococcus coralloides DSM 2259 chromosome, complete genomeresponse regulator2e-0858.2
NC_010172:798923:8172928172928189051614Methylobacterium extorquens PA1, complete genomeATP-binding region ATPase domain protein4e-0857.4
NC_013223:1090397:1110149111014911125602412Desulfohalobium retbaense DSM 5692, complete genomePAS/PAC sensor hybrid histidine kinase4e-0857.4
NC_011757:517000:5364535364535397223270Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase4e-0857
NC_008312:4795204:4813106481310648166243519Trichodesmium erythraeum IMS101, complete genomeadenylate/guanylate cyclase5e-0857
NC_007512:944941:9678019678019698972097Pelodictyon luteolum DSM 273, complete genomePAS/PAC sensor hybrid histidine kinase5e-0857
NC_011979:4293859:1404914049155991551Geobacter sp. FRC-32, complete genomemulti-sensor signal transduction histidine kinase5e-0857
NC_014972:1923035:1935850193585019381862337Desulfobulbus propionicus DSM 2032 chromosome, complete genomemulti-sensor hybrid histidine kinase5e-0857
NC_011026:3009500:3034924303492430359401017Chloroherpeton thalassium ATCC 35110, complete genomeresponse regulator receiver modulated metal dependent phosphohydrolase7e-0856.6
NC_020291:79502:102027102027102410384Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeresponse regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains9e-0856.2
NC_012108:4387331:4402270440227044053743105Desulfobacterium autotrophicum HRM2, complete genometwo domain fusion protein (N:Methyl-accepting chemotaxis protein-C:sensory box histidine kinase/response regulator)1e-0755.8
NC_019908:2496149:2505557250555725068371281Brachyspira pilosicoli P43/6/78 chromosome, complete genomeUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase1e-0755.8
NC_014330:697429:7117697117697130491281Brachyspira pilosicoli 95/1000 chromosome, complete genomeUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase1e-0755.8
NC_011757:39881:4793747937503692433Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase1e-0755.8
NC_011757:4293000:4334529433452943362501722Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase2e-0755.5
NC_011146:3376816:3393758339375833975973840Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase2e-0755.1
NC_006138:2683545:2730148273014827330392892Desulfotalea psychrophila LSv54, complete genometwo-component system sensory/regulatory protein (Ntr family)2e-0754.7
NC_014844:1270618:1295778129577812976941917Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeresponse regulator receiver4e-0753.9
NC_013093:2599591:2617931261793126195711641Actinosynnema mirum DSM 43827, complete genomePAS/PAC sensor hybrid histidine kinase4e-0753.9
NC_014831:2224733:225018422501842250558375Thermaerobacter marianensis DSM 12885 chromosome, complete genomeresponse regulator receiver protein5e-0753.9
NC_012881:4097552:4103347410334741057222376Desulfovibrio salexigens DSM 2638, complete genomePAS/PAC sensor hybrid histidine kinase5e-0753.5
NC_010172:798923:8596738596738628703198Methylobacterium extorquens PA1, complete genomePAS sensor protein5e-0753.5
NC_012988:769981:8362228362228394193198Methylobacterium extorquens DM4, complete genomesensor hybrid histidine kinase with multiple PAS/PAC and response regulator receiver domains6e-0753.5
NC_006833:902744:9236259236259261052481Wolbachia endosymbiont strain TRS of Brugia malayi, completeMembrane associated signal transduction histidine kinase and receiver domain6e-0753.5
NC_014972:480355:4918384918384932051368Desulfobulbus propionicus DSM 2032 chromosome, complete genomeFis family two component sigma54 specific transcriptional regulator8e-0753.1
NC_011757:3486283:3524427352442735276243198Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase8e-0753.1
NC_008577:2402165:2402165240216524055243360Shewanella sp. ANA-3 chromosome 1, complete sequenceputative PAS/PAC sensor protein1e-0652.4
NC_007912:2768363:2786848278684827883411494Saccharophagus degradans 2-40, complete genomediguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)1e-0652.4
NC_013222:1659619:1659619165961916609441326Robiginitalea biformata HTCC2501, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family protein1e-0652.4
NC_015164:1158796:117254411725441173254711Bacteroides salanitronis DSM 18170 chromosome, complete genometwo component transcriptional regulator, winged helix family2e-0652
NC_011146:3089297:3089297308929730924403144Geobacter bemidjiensis Bem, complete genomePAS/PAC sensor hybrid histidine kinase2e-0652
NC_020209:1903830:191001719100171910394378Pseudomonas poae RE*1-1-14, complete genomeresponse regulator2e-0652
NC_017208:256163:268564268564269265702Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetwo-component response regulator2e-0652
NC_014171:261952:269287269287269988702Bacillus thuringiensis BMB171 chromosome, complete genometwo-component response regulator2e-0651.6
NC_004113:1026886:1048486104848610511012616Thermosynechococcus elongatus BP-1, complete genometwo-component hybrid sensor & regulator3e-0651.2
NC_014355:2210884:2225827222582722272421416Candidatus Nitrospira defluvii, complete genomesigma-54 dependent response regulator FleQ3e-0651.2
NC_020209:1903830:1920733192073319224031671Pseudomonas poae RE*1-1-14, complete genomeputative two-component sensor histidine kinase3e-0651.2
NC_014640:4532095:453331345333134533702390Achromobacter xylosoxidans A8 chromosome, complete genomeresponse regulator 123e-0651.2
NC_018012:1326553:1365280136528013674902211Thiocystis violascens DSM 198 chromosome, complete genomediguanylate cyclase3e-0650.8
NC_015593:2696000:2714665271466527168332169Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)4e-0650.8
NC_011060:1746000:1749068174906817524153348Pelodictyon phaeoclathratiforme BU-1, complete genomePAS/PAC sensor hybrid histidine kinase4e-0650.8
NC_012811:959725:973030973030973848819Methylobacterium extorquens AM1 megaplasmid, complete sequencehypothetical protein5e-0650.4
NC_012918:1814000:1823304182330418264473144Geobacter sp. M21 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase5e-0650.4
NC_018012:1326553:132886713288671329232366Thiocystis violascens DSM 198 chromosome, complete genomeresponse regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains5e-0650.1
NC_011146:3720658:3720658372065837234022745Geobacter bemidjiensis Bem, complete genomePAS/PAC sensor hybrid histidine kinase6e-0650.1
NC_011894:6708970:6710443671044367124251983Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase7e-0649.7
NC_018012:1076839:1101317110131711024471131Thiocystis violascens DSM 198 chromosome, complete genomeresponse regulator containing a CheY-like receiver domain and an HD-GYP domain7e-0649.7
NC_012808:3711806:3728812372881237304761665Methylobacterium extorquens AM1, complete genome8e-0649.7
NC_010172:3712000:3725376372537637274122037Methylobacterium extorquens PA1, complete genomePAS sensor protein9e-0649.7