Pre_GI: BLASTP Hits

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Query: NC_014323:3976351:4001956 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 4001956, End: 4002888, Length: 933

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020126:6344827:6350903635090363519041002Myxococcus stipitatus DSM 14675, complete genomeNAD-dependent epimerase/dehydratase4e-107387
NC_015711:7471500:747746874774687478445978Myxococcus fulvus HW-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase family protein3e-99361
NC_008095:5527707:553376755337675534744978Myxococcus xanthus DK 1622, complete genomeNAD-dependent epimerase/dehydratase family protein5e-99360
NC_013730:6933754:695459969545996955513915Spirosoma linguale DSM 74, complete genomeNAD-dependent epimerase/dehydratase3e-2099.4
NC_013440:6045708:605420060542006055165966Haliangium ochraceum DSM 14365, complete genomeNAD-dependent epimerase/dehydratase5e-2098.6
NC_019673:8581000:860743686074368608341906Saccharothrix espanaensis DSM 44229 complete genomeNAD-dependent epimerase/dehydratase9e-1994.4
NC_011001:2327633:234873423487342349657924Burkholderia cenocepacia J2315 chromosome 2, complete sequenceNAD dependent epimerase/dehydratase family protein2e-1376.6
NC_003155:590500:604002604002604904903Streptomyces avermitilis MA-4680, complete genomehypothetical protein2e-1376.6
NC_009921:5681677:569253256925325693458927Frankia sp. EAN1pec, complete genomeNAD-dependent epimerase/dehydratase1e-1273.9
NC_009464:2523092:254704325470432547963921Uncultured methanogenic archaeon RC-I, complete genomeputative UDP-glucose 4-epimerase5e-1168.6
NC_020450:1254849:126914612691461270060915Lactococcus lactis subsp. lactis IO-1 DNA, complete genomesaccharopine dehydrogenase related protein9e-1167.8
NC_011894:4360577:436278343627834363772990Methylobacterium nodulans ORS 2060, complete genomeNAD-dependent epimerase/dehydratase3e-1066.2
NC_020911:83717:106465106465107400936Octadecabacter antarcticus 307, complete genomehypothetical protein2e-0963.2
NC_020911:1859210:187754218775421878477936Octadecabacter antarcticus 307, complete genomehypothetical protein1e-0860.5
NC_007651:1662558:167814416781441679142999Burkholderia thailandensis E264 chromosome I, complete sequenceepimerase/dehydratase7e-0755.1
NC_014323:4792048:4803297480329748042981002Herbaspirillum seropedicae SmR1 chromosome, complete genomeNAD_dependent epimerase/dehydratase4e-0652.4
NC_015942:3147514:316034931603493161293945Acidithiobacillus ferrivorans SS3 chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-0651.6