Pre_GI: BLASTP Hits

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Query: NC_014323:2680085:2700819 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 2700819, End: 2701415, Length: 597

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:3627588:3644135364413536459041770Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein8e-1477
NC_010511:2079744:2132561213256121335831023Methylobacterium sp. 4-46 chromosome, complete genomelytic transglycosylase1e-1272.8
NC_009664:533021:5479845479845490901107Kineococcus radiotolerans SRS30216, complete genomeLytic transglycosylase catalytic2e-1272
NC_011894:2184956:220462022046202205339720Methylobacterium nodulans ORS 2060, complete genomeLytic transglycosylase catalytic4e-1271.2
NC_010511:6067000:6100598610059861016201023Methylobacterium sp. 4-46 chromosome, complete genomelytic transglycosylase1e-1169.7
NC_010172:57500:9066790667917581092Methylobacterium extorquens PA1, complete genomeLytic transglycosylase catalytic2e-1168.6
NC_011283:4170369:4194180419418041961051926Klebsiella pneumoniae 342 chromosome, complete genometransglycosylase SLT domain-containing protein5e-1167.8
NC_020211:2123819:2123819212381921258252007Serratia marcescens WW4, complete genomelytic transglycosylase catalytic subunit7e-1167
NC_016845:2306744:2309391230939123113942004Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,lytic transglycosylase, catalytic9e-1063.5
NC_014550:3377834:3386168338616833872981131Arthrobacter arilaitensis Re117, complete genomeputative M23 family peptidase1e-0962.8
NC_016845:1285435:1323839132383913257641926Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transglycosylase1e-0962.8
NC_013093:2599591:259959125995912600574984Actinosynnema mirum DSM 43827, complete genomeLytic transglycosylase catalytic2e-0962.4
NC_010102:1829357:1849885184988518519662082Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0962
NC_005085:1269787:1318086131808613199481863Chromobacterium violaceum ATCC 12472, complete genomepeptidoglycan N-acetylmuramoylhydrolase4e-0961.2
NC_009483:5113729:512062851206285121383756Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase5e-0961.2
NC_014910:1765065:1787239178723917887531515Alicycliphilus denitrificans BC chromosome, complete genomelytic transglycosylase catalytic6e-0960.8
NC_010524:2117347:2140306214030621420421737Leptothrix cholodnii SP-6, complete genomeLytic transglycosylase catalytic7e-0960.5
NC_011772:1575674:159336415933641594149786Bacillus cereus G9842, complete genometransglycosylase, SLT family2e-0859.3
NC_014311:978761:9942009942009961671968Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein2e-0858.9
NC_015856:1733500:1733670173367017351781509Collimonas fungivorans Ter331 chromosome, complete genomemembrane-bound lytic murein transglycosylase D3e-0858.5
NC_015437:697051:7302427302427320621821Selenomonas sputigena ATCC 35185 chromosome, complete genomeLytic transglycosylase catalytic5e-0857.8
NC_000964:2146000:2248350224835022552076858Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein7e-0857.4
NC_010814:2217153:224462722446272245265639Geobacter lovleyi SZ, complete genomeLytic transglycosylase catalytic7e-0857.4
NC_014212:501449:510294510294510758465Meiothermus silvanus DSM 9946 chromosome, complete genomeLytic transglycosylase catalytic7e-0857.4
NC_015425:2277570:229041522904152291074660Clostridium botulinum BKT015925 chromosome, complete genomelytic murein transglycosylase5e-0857.4
NC_007644:1638083:164380416438041644424621Moorella thermoacetica ATCC 39073, complete genomeLytic transglycosylase, catalytic9e-0856.6
NC_007298:1418500:1436224143622414377621539Dechloromonas aromatica RCB, complete genomePeptidoglycan-binding LysM:Lytic transglycosylase, catalytic2e-0755.8
NC_012438:1514376:153180115318011532712912Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomemembrane-bound lytic murein transglycosylase D2e-0755.5
NC_014219:1736000:175182117518211752510690Bacillus selenitireducens MLS10 chromosome, complete genomeLytic transglycosylase catalytic2e-0755.5
NC_007511:1147696:1170317117031711714201104Burkholderia sp. 383 chromosome 2, complete sequenceLytic transglycosylase, catalytic3e-0755.1
NC_020126:5849483:5854845585484558570492205Myxococcus stipitatus DSM 14675, complete genomeglutamine ABC transporter substrate-binding protein6e-0754.3
NC_011660:1889504:189604518960451896713669Listeria monocytogenes HCC23 chromosome, complete genometransglycosylase6e-0754.3
NC_015277:6213304:621739762173976218191795Sphingobacterium sp. 21 chromosome, complete genomeLytic transglycosylase catalytic7e-0753.9
NC_013194:963735:997671997671998336666Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeLytic transglycosylase catalytic8e-0753.5
NC_013891:640784:657261657261657935675Listeria seeligeri serovar 1/2b str. SLCC3954, complete genometransglycosylase, SLT family9e-0753.5
NC_008702:2259430:2259430225943022608781449Azoarcus sp. BH72, complete genomemembrane-bound lytic murein transglycosylase D1e-0653.1
NC_015850:2048251:211015521101552111087933Acidithiobacillus caldus SM-1 chromosome, complete genomelytic transglycosylase1e-0653.1
NC_007484:3358000:3379970337997033814811512Nitrosococcus oceani ATCC 19707, complete genomeLytic transglycosylase1e-0653.1
NC_015850:1155376:117330311733031173821519Acidithiobacillus caldus SM-1 chromosome, complete genomelytic transglycosylase1e-0652.8
NC_008555:696217:712724712724713407684Listeria welshimeri serovar 6b str. SLCC5334, complete genometransglycosylase, SLT family1e-0652.8
NC_013222:817686:8574128574128588721461Robiginitalea biformata HTCC2501, complete genomeextracellular solute-binding protein, family 32e-0652.4
NC_020126:8984500:898707289870728987959888Myxococcus stipitatus DSM 14675, complete genometransglycosylase SLT domain-containing protein2e-0652.4
NC_009092:4337617:435105243510524351783732Shewanella loihica PV-4, complete genomeLytic transglycosylase, catalytic3e-0651.6
NC_014972:137184:158025158025158633609Desulfobulbus propionicus DSM 2032 chromosome, complete genomelytic transglycosylase catalytic4e-0651.2
NC_014722:771483:7925017925017942251725Burkholderia rhizoxinica HKI 454, complete genomemembrane-bound lytic murein transglycosylase D precursor6e-0650.8
NC_013730:2187898:219013721901372190967831Spirosoma linguale DSM 74, complete genomeLytic transglycosylase catalytic7e-0650.4
NC_007519:3527207:3539285353928535409191635Desulfovibrio alaskensis G20 chromosome, complete genomepeptidoglycan-binding LysM7e-0650.4