Pre_GI: BLASTP Hits

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Query: NC_014169:1909482:1915196 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 1915196, End: 1916326, Length: 1131

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015275:654959:6568556568556579761122Clostridium lentocellum DSM 5427 chromosome, complete genomeglycoside hydrolase family 82e-96352
NC_010001:3895264:3910130391013039112751146Clostridium phytofermentans ISDg, complete genomeglycoside hydrolase family 87e-96350
NC_011898:1558208:1559728155972815608581131Clostridium cellulolyticum H10, complete genomeglycoside hydrolase family 81e-93343
NC_016627:1213357:1234153123415312356041452Clostridium clariflavum DSM 19732 chromosome, complete genomeendoglucanase Y2e-1273.9
NC_011138:831585:8304888304888315881101Alteromonas macleodii 'Deep ecotype', complete genomeendoglucanase Y5e-0962.4
NC_014828:943911:970624970624971613990Ethanoligenens harbinense YUAN-3 chromosome, complete genomeglycoside hydrolase family 88e-0755.1
NC_015690:1726000:1756384175638417585852202Paenibacillus mucilaginosus KNP414 chromosome, complete genomechitosanase-glucanase2e-0653.5
NC_016935:2256000:2286428228642822886292202Paenibacillus mucilaginosus 3016 chromosome, complete genomechitosanase-glucanase3e-0653.5