Pre_GI: BLASTP Hits

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Query: NC_014034:995661:1011424 Rhodobacter capsulatus SB1003 chromosome, complete genome

Start: 1011424, End: 1012062, Length: 639

Host Lineage: Rhodobacter capsulatus; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain is a derivative strain isolated in the laboratory of Barry Marrs from the classical progenitor strain B10. It is rifampicin-resistant, produces GTA, and is capable of growing under high illumination (resistant to photooxidative killing). Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to use photosynthesis and usually can grow under both anaerobic and aerobic conditions. This organism is a facultatively phototrophic purple non-sulfur bacterium and the type species of the Rhodobacter group. The colony's color depends largely on the amount of oxygen present in its environment. While it is able to produce cellular energy in a number of different ways, it can rely on anoxygenic photosynthesis under anaerobic conditions in the presence of light. Some strains produce the Gene Transfer Element (GTA), a pro-phage particle capable of transferring genetic material between strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009937:4122652:413172941317294132214486Azorhizobium caulinodans ORS 571, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-22105
NC_002947:2589951:259108225910822591531450Pseudomonas putida KT2440, complete genomeN-acetylmuramoyl-L-alanine amidase, putative6e-22103
NC_002940:78392:820238202382544522Haemophilus ducreyi 35000HP, complete genomepossible N-acetylmuramoyl-L-alanine amidase4e-1477.8
NC_013132:327743:331484331484331894411Chitinophaga pinensis DSM 2588, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD5e-1477.8
NC_020125:194691:201926201926202375450Riemerella anatipestifer RA-CH-2, complete genomeNegative regulator of beta-lactamase expression1e-1272.8
NC_004663:2509433:254439625443962544833438Bacteroides thetaiotaomicron VPI-5482, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1270.5
NC_014033:1062935:107469210746921075111420Prevotella ruminicola 23 chromosome, complete genomeprophage PRU01 N-acetylmuramoyl-L-alanine amidase1e-1169.7
NC_004663:2014035:203165820316582032071414Bacteroides thetaiotaomicron VPI-5482, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1066.2
NC_015177:1131173:114429711442971145226930Pedobacter saltans DSM 12145 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 22e-1065.5
NC_015160:937317:954145954145954609465Odoribacter splanchnicus DSM 20712 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 23e-1065.1
NC_009615:322107:326278326278326724447Parabacteroides distasonis ATCC 8503 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-0963.5
NC_009511:4882047:491115849111584911598441Sphingomonas wittichii RW1 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0962.8
NC_014657:914071:932635932635933078444Caldicellulosiruptor owensensis OL chromosome, complete genomen-acetylmuramoyl-l-alanine amidase family 21e-0962.8
NC_014933:2397518:240412324041232404617495Bacteroides helcogenes P 36-108 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 22e-0962.4
NC_017297:3428429:342931934293193430221903Clostridium botulinum F str. 230613 chromosome, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-0962.4
NC_009699:3429817:343070734307073431609903Clostridium botulinum F str. Langeland chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0962.4
NC_009614:3081190:309159730915973092115519Bacteroides vulgatus ATCC 8482 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-0961.2
NC_009615:644757:650831650831651277447Parabacteroides distasonis ATCC 8503 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase8e-0960.5
NC_006347:3166000:318371231837123184185474Bacteroides fragilis YCH46, complete genomeN-acetylmuramoyl-L-alanine amidase1e-0860.1
NC_009615:1849237:186592118659211866367447Parabacteroides distasonis ATCC 8503 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-0860.1
NC_014933:510164:560362560362560802441Bacteroides helcogenes P 36-108 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 22e-0858.9
NC_016776:3258939:328244832824483282897450Bacteroides fragilis 638R, complete genomeputative N-acetylmuramoyl-L-alanine amidase4e-0858.2
NC_003228:3212500:324505032450503245499450Bacteroides fragilis NCTC 9343, complete genomeputative N-acetylmuramoyl-L-alanine amidase4e-0858.2
NC_009614:3748950:375560737556073756125519Bacteroides vulgatus ATCC 8482 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-0857.4
NC_016776:2956444:299380429938042994247444Bacteroides fragilis 638R, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-0652.8