Pre_GI: BLASTP Hits

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Query: NC_013941:2425233:2438361 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 2438361, End: 2439014, Length: 654

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011353:2563056:257618425761842576837654Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenon-LEE-encoded effector EspJ5e-126449
NC_002695:2655445:266857326685732669226654Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-126449
NC_002655:2730659:274379027437902744443654Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933U5e-126449
NC_013008:2561586:257529925752992575817519Escherichia coli O157:H7 str. TW14359 chromosome, complete genometranslocated type III secretion system effector4e-99360
NC_013364:863209:886497886497887150654Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspJ1e-96352
NC_011601:756885:770711770711771364654Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS secreted effector EspJ-like protein1e-96352
NC_013716:5141269:515588851558885156541654Citrobacter rodentium ICC168, complete genomeT3SS effector protein EspJ1e-94345