Pre_GI: BLASTP Hits

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Query: NC_013929:6371019:6392714 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6392714, End: 6393367, Length: 654

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019673:1039258:105072310507231051367645Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, LuxR family5e-33140
NC_014210:2372813:238542723854272386074648Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,two component transcriptional regulator, LuxR family9e-33140
NC_008278:81866:902369023690880645Frankia alni ACN14a, complete genometwo-component system response regulator6e-32137
NC_013093:1036772:105286410528641053508645Actinosynnema mirum DSM 43827, complete genometwo component transcriptional regulator, LuxR family5e-30130
NC_013093:3068486:309714630971463097826681Actinosynnema mirum DSM 43827, complete genometwo component transcriptional regulator, LuxR family4e-29127
NC_013757:2630000:264637226463722647019648Geodermatophilus obscurus DSM 43160, complete genometwo component transcriptional regulator, LuxR family8e-29127
NC_017186:1320186:133640213364021337043642Amycolatopsis mediterranei S699 chromosome, complete genometwo-component system response regulator9e-29126
NC_014318:1320170:133638613363861337018633Amycolatopsis mediterranei U32 chromosome, complete genometwo-component system response regulator5e-28124
NC_013093:3157897:317696831769683177612645Actinosynnema mirum DSM 43827, complete genometwo component transcriptional regulator, LuxR family1e-24113
NC_016887:3255500:3255638325563832572721635Nocardia cyriacigeorgica GUH-2, complete genomeSerine/threonine protein kinase4e-22104
NC_008278:874015:888614888614889249636Frankia alni ACN14a, complete genomeputative two-component system response regulator1e-21103
NC_006087:2008000:201252920125292013200672Leifsonia xyli subsp. xyli str. CTCB07, complete genometwo-component system, regulatory protein1e-1996.3
NC_015312:6717973:671797367179736718620648Pseudonocardia dioxanivorans CB1190 chromosome, complete genometwo component LuxR family transcriptional regulator2e-1892
NC_013595:196493:215303215303216028726Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein2e-1582.4
NC_018750:1591895:160845116084511609095645Streptomyces venezuelae ATCC 10712, complete genomeputative two-component system response regulator4e-0651.6