Pre_GI: BLASTP Hits

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Query: NC_013890:53538:76767 Dehalococcoides sp. GT chromosome, complete genome

Start: 76767, End: 76967, Length: 201

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007519:3391090:339433933943393394593255Desulfovibrio alaskensis G20 chromosome, complete genomeputative transcriptional regulator6e-1889.4
NC_009076:3564500:359821635982163598467252Burkholderia pseudomallei 1106a chromosome I, complete sequenceprophage CP4-57 regulatory protein (AlpA)8e-1889
NC_020418:116500:138018138018138203186Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-1787.4
NC_014365:2810405:283816528381652838374210Desulfarculus baarsii DSM 2075 chromosome, complete genomeDNA binding domain protein, excisionase family1e-1582
NC_012490:3094857:311205831120583112291234Rhodococcus erythropolis PR4, complete genomehypothetical protein2e-1580.9
NC_014365:2843126:287791628779162878140225Desulfarculus baarsii DSM 2075 chromosome, complete genomephage transcriptional regulator, AlpA5e-1579.7
NC_014844:1818939:182188718218871822090204Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeexcisionase family DNA-binding domain-containing protein8e-1579
NC_009446:174951:200173200173200376204Dichelobacter nodosus VCS1703A, complete genomehypothetical protein8e-1579
NC_016620:781995:793788793788793967180Bacteriovorax marinus SJ, complete genomehypothetical protein4e-1476.6
NC_015711:3122000:314409531440953144304210Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein2e-1374.3
NC_021184:4456904:447102344710234471277255Desulfotomaculum gibsoniae DSM 7213, complete genomeDNA-binding protein, excisionase family8e-1372.4
NC_010645:558974:571956571956572186231Bordetella avium 197N, complete genomehypothetical protein2e-1270.9
NC_014828:1335154:136475813647581364949192Ethanoligenens harbinense YUAN-3 chromosome, complete genomeDNA binding domain protein, excisionase family1e-0961.6
NC_016048:3947663:396262639626263962820195Oscillibacter valericigenes Sjm18-20, complete genomeputative AlpA family transcriptional regulator3e-0960.8
NC_016148:463840:485204485204485512309Thermovirga lienii DSM 17291 chromosome, complete genomehypothetical protein5e-0960.1
NC_008095:2117952:213192321319232132180258Myxococcus xanthus DK 1622, complete genomeDNA-binding protein, excisionase family1e-0858.5
NC_012778:1573847:159295515929551593149195Eubacterium eligens ATCC 27750, complete genomehypothetical protein2e-0858.2
NC_016077:2044876:205695820569582057152195Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein2e-0754.7
NC_016077:2044876:205506420550642055315252Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein2e-0754.7
NC_016077:2044876:205574020557402055928189Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein3e-0753.9
NC_015500:1923514:196319519631951963845651Treponema brennaborense DSM 12168 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN3e-0753.9
NC_014650:603500:619661619661619846186Geobacillus sp. Y4.1MC1 chromosome, complete genomeexcisionase5e-0753.1
NC_014844:1773424:178791317879131788101189Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeexcisionase family DNA-binding domain-containing protein6e-0752.8
NC_008752:166877:171086171086171298213Acidovorax avenae subsp. citrulli AAC00-1, complete genomeDNA binding domain, excisionase family9e-0752.4
NC_013890:191616:202464202464202646183Dehalococcoides sp. GT chromosome, complete genomeDNA binding domain protein, excisionase family1e-0651.6
NC_011660:2541632:257922425792242579409186Listeria monocytogenes HCC23 chromosome, complete genomeprophage CP4-57 regulatory protein2e-0651.2
NC_009455:173374:191300191300191470171Dehalococcoides sp. BAV1 chromosome, complete genome4e-0650.1
NC_003212:57061:825048250482689186Listeria innocua Clip11262, complete genomehypothetical protein8e-0649.3