Pre_GI Gene

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Host: NC_013890 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013890:191616 Dehalococcoides sp. GT chromosome, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
191616192329714hypothetical proteinBLASTP
192341192724384hypothetical proteinBLASTP
192736193314579hypothetical proteinBLASTP
193324193797474hypothetical proteinBLASTP
193797194492696integrase family proteinQuickGO ontologyBLASTP
194485194790306hypothetical proteinBLASTP
1947901963341545protein of unknown function DUF192QuickGO ontologyBLASTP
196338196874537hypothetical proteinBLASTP
196977197609633hypothetical proteinBLASTP
197953198558606hypothetical proteinBLASTP
1987031999621260DNA polymerase III beta chainQuickGO ontologyBLASTP
200288200476189hypothetical proteinBLASTP
200541200876336hypothetical proteinBLASTP
200946201428483hypothetical proteinBLASTP
201482201799318hypothetical proteinBLASTP
201841202326486hypothetical proteinBLASTP
202464202646183DNA binding domain protein excisionase familyQuickGO ontologyBLASTP
2027172059053189helicase domain proteinQuickGO ontologyBLASTP
2058982092453348hypothetical proteinBLASTP
209277209618342hypothetical protein
209665210291627hypothetical protein
210313211092780hypothetical proteinBLASTP
2110892130051917hypothetical proteinBLASTP
2130562152212166hypothetical proteinBLASTP