Pre_GI: BLASTP Hits

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Query: NC_013890:191616:211089 Dehalococcoides sp. GT chromosome, complete genome

Start: 211089, End: 213005, Length: 1917

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014365:2843126:2853667285366728557572091Desulfarculus baarsii DSM 2075 chromosome, complete genomehypothetical protein4e-46186
NC_006582:4256915:4265425426542542667171293Bacillus clausii KSM-K16, complete genomehypothetical protein2e-29130
NC_011891:1225000:1240009124000912413521344Anaeromyxobacter dehalogenans 2CP-1, complete genomePP-loop superfamily ATPase-like protein2e-28128
NC_008611:3579500:3585781358578135870431263Mycobacterium ulcerans Agy99, complete genomehypothetical protein1e-26122
NC_020133:2421965:2436242243624224375041263Mycobacterium liflandii 128FXT, complete genomehypothetical protein5e-26119
NC_013194:1040197:1046486104648610478621377Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completehypothetical protein6e-26119
NC_011985:3282924:3285642328564232869071266Agrobacterium radiobacter K84 chromosome 1, complete genomehypothetical protein1e-25119
NC_011662:1017933:1029596102959610309631368Thauera sp. MZ1T, complete genomehypothetical protein1e-24115
NC_015410:3093465:3133289313328931346561368Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein9e-24112
NC_014217:2020737:2025824202582420272091386Starkeya novella DSM 506 chromosome, complete genomehypothetical protein2e-23111
NC_004431:4270305:4297605429760542989241320Escherichia coli CFT073, complete genomehypothetical protein1e-22108
NC_011742:4655373:4664727466472746660461320Escherichia coli S88 chromosome, complete genomehypothetical protein1e-22108
NC_008563:4739333:4750065475006547513841320Escherichia coli APEC O1, complete genomehypothetical protein1e-22108
NC_013716:5201097:5261318526131852626371320Citrobacter rodentium ICC168, complete genomeputative DNA binding protein1e-22108
NC_009338:3029507:3043968304396830453321365Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein2e-22107
NC_008358:263458:2781712781712795411371Hyphomonas neptunium ATCC 15444, complete genomehypothetical protein9e-22105
NC_010337:98974:1081891081891095501362Heliobacterium modesticaldum Ice1, complete genomehypothetical protein4e-21103
NC_010162:8528116:8539094853909485404011308Sorangium cellulosum 'So ce 56', complete genomehypothetical protein4e-21103
NC_020210:788639:8003688003688015671200Geobacillus sp. GHH01, complete genomehypothetical protein2e-20101
NC_009792:3245368:3267710326771032690501341Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1999
NC_015381:1623587:1631205163120516326081404Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein3e-1790.5
NC_007086:2887875:2953905295390529551911287Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein4e-1790.5
NC_008347:2515921:2520988252098825223071320Maricaulis maris MCS10, complete genomehypothetical protein6e-1789.7
NC_010510:409469:4120104120104133171308Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completehypothetical protein7e-1789.4
NC_020181:5130513:5150006515000651512711266Enterobacter aerogenes EA1509E, complete genomeFIG014574: hypothetical protein2e-1688.2
NC_008061:190287:2134892134892147751287Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencehypothetical protein2e-1687.8
NC_010322:5349000:5380099538009953813671269Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein7e-1686.3
NC_011283:1178500:1192263119226311935281266Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein8e-1685.9
NC_010515:2111691:2137989213798921390981110Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencehypothetical protein2e-1584.7
NC_007948:1972290:1994726199472619961261401Polaromonas sp. JS666, complete genomehypothetical protein1e-1481.6
NC_006513:1379735:1425656142565614270291374Azoarcus sp. EbN1, complete genomehypothetical protein1e-1379
NC_007973:2348481:2368681236868123699401260Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein2e-1067.8