Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3543012 Citrobacter rodentium ICC168, complete genome

Start: 3543012, End: 3543440, Length: 429

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:3328844:334511033451103345643534Enterobacter aerogenes EA1509E, complete genomeFIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)2e-74276
NC_016845:4539381:454202745420274542596570Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-35147
NC_009708:4182460:419818641981864198824639Yersinia pseudotuberculosis IP 31758 chromosome, complete genometransglycosylase5e-32135
NC_012731:600518:617570617570618088519Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-31133
NC_014029:331919:360482360482361174693Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-28124
NC_004129:5373886:542417254241725424723552Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-27120
NC_009832:358291:375841375841376533693Serratia proteamaculans 568, complete genomeLytic transglycosylase catalytic5e-27119
NC_004547:611178:624021624021624608588Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein6e-27119
NC_015566:316340:330295330295330981687Serratia sp. AS12 chromosome, complete genomelytic transglycosylase catalytic subunit9e-27118
NC_015567:313035:330460330460331146687Serratia sp. AS9 chromosome, complete genomelytic transglycosylase catalytic subunit9e-27118
NC_007005:1636875:164362716436271644184558Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein3e-24110
NC_009138:1974935:201218120121812012771591Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide2e-24110
NC_008752:558828:573364573364573972609Acidovorax avenae subsp. citrulli AAC00-1, complete genomeLytic transglycosylase, catalytic3e-23107
NC_011992:1234610:123678112367811237371591Acidovorax ebreus TPSY, complete genomeLytic transglycosylase catalytic4e-23106
NC_008825:2525380:254374625437462544366621Methylibium petroleiphilum PM1, complete genomehypothetical protein5e-23106
NC_014532:3555550:357369035736903574481792Halomonas elongata DSM 2581, complete genomelytic transglycosylase, catalytic6e-23105
NC_009656:4527457:462777946277794628360582Pseudomonas aeruginosa PA7 chromosome, complete genomesoluble lytic murein transglycosylase7e-23105
NC_018080:5091772:515278751527875153368582Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein8e-23105
NC_010170:1498253:153267115326711533261591Bordetella petrii, complete genomeconserved exported protein1e-22105
NC_010170:4533416:453615045361504536755606Bordetella petrii, complete genomeconserved exported protein3e-22103
NC_010002:4544818:455964445596444560249606Delftia acidovorans SPH-1, complete genomeLytic transglycosylase catalytic3e-22103
NC_011662:1058794:106148910614891062109621Thauera sp. MZ1T, complete genomeLytic transglycosylase catalytic3e-22103
NC_015422:1876102:187610218761021876722621Alicycliphilus denitrificans K601 chromosome, complete genomelytic transglycosylase catalytic subunit5e-22102
NC_008782:2326439:234502623450262345646621Acidovorax sp. JS42, complete genomeLytic transglycosylase, catalytic9e-22102
NC_011901:2983555:298297429829742983558585Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completelytic transglycosylase1e-21102
NC_003919:2639080:263908026390802639691612Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein1e-21101
NC_006513:1379735:145965414596541460235582Azoarcus sp. EbN1, complete genomehypothetical protein2e-21100
NC_012691:2614603:265685726568572657447591Tolumonas auensis DSM 9187, complete genomeLytic transglycosylase catalytic4e-21100
NC_012912:483390:515976515976516566591Dickeya zeae Ech1591, complete genomeputative signal peptide2e-2097.4
NC_016830:3869572:392583039258303926225396Pseudomonas fluorescens F113 chromosome, complete genomeSoluble lytic murein transglycosylase subunit7e-2095.9
NC_008344:49039:969949699497584591Nitrosomonas eutropha C91, complete genomeLytic transglycosylase, catalytic4e-1993.6
NC_015572:2186394:219838421983842198950567Methylomonas methanica MC09 chromosome, complete genomelytic transglycosylase catalytic subunit7e-1579.3
NC_007484:667879:677299677299677862564Nitrosococcus oceani ATCC 19707, complete genomeLytic transglycosylase, catalytic4e-1373.6
NC_017062:547317:569324569324570112789Rickettsia typhi str. B9991CWPP chromosome, complete genomehypothetical protein5e-1269.7
NC_010125:1651687:167257916725791673541963Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transglycosylase1e-0962
NC_010554:2646806:265392226539222654470549Proteus mirabilis HI4320, complete genomephage transglycosylase6e-0959.7
NC_007626:2354260:239560523956052396444840Magnetospirillum magneticum AMB-1, complete genomeSoluble lytic murein transglycosylase and related regulatory protein4e-0857
NC_009937:673820:694129694129694668540Azorhizobium caulinodans ORS 571, complete genomehypothetical transmembrane protein4e-0753.5
NC_015850:2048251:208841620884162089186771Acidithiobacillus caldus SM-1 chromosome, complete genomemembrane bound transglycosylase family protein6e-0752.8