Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3528911 Citrobacter rodentium ICC168, complete genome

Start: 3528911, End: 3530713, Length: 1803

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012108:4971086:5023022502302250248721851Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein2e-115416
NC_015424:2726223:2753261275326127550481788Aeromonas veronii B565 chromosome, complete genomehypothetical protein3e-98359
NC_014500:3097362:3144145314414531460251881Dickeya dadantii 3937 chromosome, complete genomehypothetical protein5e-87322
NC_010995:4338860:4349472434947243513731902Cellvibrio japonicus Ueda107, complete genomehypothetical protein1e-75284
NC_014910:755192:7591777591777611351959Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein4e-70266
NC_010842:2250119:2283206228320622849331728Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomehypothetical protein7e-38159
NC_010602:2244729:2277820227782022795471728Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'hypothetical protein7e-38159
NC_011751:1859606:1875865187586518776521788Escherichia coli UMN026 chromosome, complete genomehypothetical protein7e-25115
NC_003919:1716831:1742105174210517440151911Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein6e-21102
NC_010688:3229820:3239477323947732413601884Xanthomonas campestris pv. campestris, complete genomehypothetical protein8e-2099.4
NC_010943:2499092:2497189249718924991141926Stenotrophomonas maltophilia K279a, complete genomehypothetical protein5e-1583.2
NC_012225:1497934:1515036151503615167901755Brachyspira hyodysenteriae WA1, complete genomehypothetical protein1e-1482.4
NC_002516:1474000:1483898148389814857631866Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-1068.2
NC_012856:3270709:3276628327662832784361809Ralstonia pickettii 12D chromosome 1, complete genomehypothetical protein8e-0755.8