Pre_GI: BLASTP Hits

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Query: NC_013716:3327881:3326622 Citrobacter rodentium ICC168, complete genome

Start: 3326622, End: 3327884, Length: 1263

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010002:4175809:419400741940074194879873Delftia acidovorans SPH-1, complete genomeProtocatechuate 4,5-dioxygenase5e-66251
NC_015563:3401867:340186734018673402739873Delftia sp. Cs1-4 chromosome, complete genomeprotocatechuate 4,5-dioxygenase1e-65250
NC_009376:446224:470685470685471515831Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeextradiol ring-cleavage dioxygenase III subunit B4e-28126
NC_016147:2964178:297445429744542975260807Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeprotocatechuate 4,5-dioxygenase subunit beta2e-21103
NC_014098:2332938:234623223462322347038807Bacillus tusciae DSM 2912 chromosome, complete genomeExtradiol ring-cleavage dioxygenase class III protein subunit B4e-21102
NC_009376:483307:483307483307483894588Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeprotocatechuate 4,5-dioxygenase3e-1893.2
NC_008786:1507139:153157115315711531882312Verminephrobacter eiseniae EF01-2, complete genomeExtradiol ring-cleavage dioxygenase LigAB, LigA subunit2e-1377
NC_002927:4392768:4395098439509843961321035Bordetella bronchiseptica RB50, complete genomeputative dioxygenase7e-1272
NC_013595:5221330:524006152400615240939879Streptosporangium roseum DSM 43021, complete genomehypothetical protein1e-1068.2
NC_015554:4002952:400954440095444010371828Alteromonas sp. SN2 chromosome, complete genomeprotocatechuate 4,5-dioxygenase subunit beta1e-0964.7
NC_016948:2931285:297894629789462979857912Mycobacterium intracellulare MOTT-64 chromosome, complete genome3-(2,3-dihydroxyphenyl)propionate dioxygenase3e-0860.5
NC_010473:1384000:138894413889441389888945Escherichia coli str. K-12 substr. DH10B, complete genome2,3-dihydroxyphenylpropionate 1,2-dioxygenase3e-0860.1
NC_007384:307013:323274323274324218945Shigella sonnei Ss046, complete genome2,3-dihydroxyphenylpropionate 1,2-dioxygenase3e-0860.1
NC_010002:4175809:419487941948794195286408Delftia acidovorans SPH-1, complete genomeprotocatechuate 4,5-dioxygenase, alpha subunit4e-0859.7
NC_018581:759932:7919357919357929481014Gordonia sp. KTR9 chromosome, complete genomeprotocatechuate 4,5-dioxygenase beta subunit1e-0655.1
NC_008705:4053070:407402640740264074976951Mycobacterium sp. KMS, complete genomeExtradiol ring-cleavage dioxygenase, class III enzyme, subunit B1e-0654.7
NC_008146:4019711:403954440395444040392849Mycobacterium sp. MCS, complete genomeExtradiol ring-cleavage dioxygenase, class III enzyme, subunit B1e-0654.7
NC_015976:814922:8188258188258198351011Sphingobium sp. SYK-6, complete genome2,2',3-trihydroxy-3'-methoxy-5, 5'-dicarboxybiphenyl dioxygenase5e-0652.8