Pre_GI: BLASTP Hits

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Query: NC_013716:2764550:2770516 Citrobacter rodentium ICC168, complete genome

Start: 2770516, End: 2770989, Length: 474

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:5130513:516336151633615163927567Enterobacter aerogenes EA1509E, complete genomehypothetical protein1e-71268
NC_011294:2053991:205712120571212057690570Salmonella enterica subsp. enterica serovar Enteritidis strphage protein8e-50195
NC_015566:3659318:366820636682063668784579Serratia sp. AS12 chromosome, complete genomephage protein1e-49194
NC_015968:3301958:331934933193493319915567Enterobacter asburiae LF7a chromosome, complete genomephage protein2e-45181
NC_011205:2180598:218510821851082185677570Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853endodeoxyribonuclease1e-44178
NC_009778:959982:971269971269971871603Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-43174
NC_009801:1756610:1774599177459917770762478Escherichia coli E24377A, complete genomeexonuclease family protein4e-39160
NC_009801:1392696:1419324141932414217952472Escherichia coli E24377A, complete genomeexonuclease family protein2e-39160
NC_009801:1419324:1419324141932414217952472Escherichia coli E24377A, complete genomeexonuclease family protein2e-39160
NC_010468:2265423:2265423226542322679002478Escherichia coli ATCC 8739, complete genomeExonuclease RNase T and DNA polymerase III2e-39160
CP002516:2305659:2308505230850523109822478Escherichia coli KO11, complete genomeExonuclease RNase T and DNA polymerase III2e-39160
NC_016902:2305659:2308505230850523109822478Escherichia coli KO11FL chromosome, complete genomeExonuclease RNase T and DNA polymerase III2e-39160
NC_011601:1269500:1269547126954712720182472Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeexonuclease2e-39160
NC_006905:368942:378809378809379357549Salmonella enterica subsp. enterica serovar Choleraesuis strEndodeoxyribonuclease5e-39159
NC_011751:1859606:1882358188235818848292472Escherichia coli UMN026 chromosome, complete genomeputative exonuclease from phage origin5e-39159
NC_012125:1330066:134026213402621340810549Salmonella enterica subsp. enterica serovar Paratyphi C strainEndodeoxyribonuclease3e-38157
CU928145:1408280:1409701140970114121722472Escherichia coli 55989 chromosome, complete genomeputative exonuclease from phage origin2e-37154
NC_011748:1408280:1409701140970114121722472Escherichia coli 55989, complete genomeputative exonuclease from phage origin2e-37154
NC_020181:2097066:2114821211482121172682448Enterobacter aerogenes EA1509E, complete genomeExodeoxyribonuclease VIII6e-36149
NC_016612:3803130:3810509381050938126472139Klebsiella oxytoca KCTC 1686 chromosome, complete genomeexodeoxyribonuclease VIII9e-36149
NC_020211:2985157:298594629859462986506561Serratia marcescens WW4, complete genomeendodeoxyribonuclease7e-29125
NC_015914:279413:289850289850290365516Cyclobacterium marinum DSM 745 chromosome, complete genomeendodeoxyribonuclease5e-22103
NC_015590:1425628:143978914397891440379591Sinorhizobium meliloti AK83 chromosome 1, complete sequenceputative exonuclease9e-22102
NC_013508:2587913:261386226138622614467606Edwardsiella tarda EIB202, complete genomeexodeoxyribonuclease VIII5e-0857