Pre_GI: BLASTP Hits

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Query: NC_013410:3787626:3790383 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3790383, End: 3791810, Length: 1428

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015690:4361000:4387115438711543887821668Paenibacillus mucilaginosus KNP414 chromosome, complete genomeCellulase2e-37157
NC_016935:4117485:4153215415321541548821668Paenibacillus mucilaginosus 3016 chromosome, complete genomecellulase2e-37157
NC_014393:3979350:3982200398220039837471548Clostridium cellulovorans 743B chromosome, complete genomeglycoside hydrolase family 52e-31137
NC_014622:5683400:5687984568798456897051722Paenibacillus polymyxa SC2 chromosome, complete genomeendoglucanase b8e-31135
NC_016641:1530905:1545364154536415470851722Paenibacillus terrae HPL-003 chromosome, complete genomeendo-1,4-beta-glucanase1e-30134
NC_016582:11820671:1185941511859415118611691755Streptomyces bingchenggensis BCW-1 chromosome, complete genomeglycoside hydrolase family protein3e-30133
NC_014371:177536:1938601938601950741215Prevotella melaninogenica ATCC 25845 chromosome chromosome II,cellulase (glycosyl hydrolase family 5)7e-28125
NC_016935:4117485:4145998414599841506384641Paenibacillus mucilaginosus 3016 chromosome, complete genomexyloglucanase6e-28125
NC_015690:4361000:4379929437992943844584530Paenibacillus mucilaginosus KNP414 chromosome, complete genomexyloglucanase5e-28125
NC_010001:3895264:3898410389841039006412232Clostridium phytofermentans ISDg, complete genomeCellulase5e-24112
NC_015172:1621223:1640733164073316422771545Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeglycoside hydrolase family 51e-0965.1
NC_015577:3688071:3700763370076337024511689Treponema azotonutricium ZAS-9 chromosome, complete genomeputative glycoside hydrolase family 52e-0861.2