Pre_GI: BLASTP Hits

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Query: NC_013410:3280039:3312014 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3312014, End: 3313024, Length: 1011

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013410:3280039:3292978329297832939881011Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein1e-121436
NC_014655:2705482:2716738271673827178591122Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein2e-51202
NC_013037:48900:7321473214743201107Dyadobacter fermentans DSM 18053, complete genomehypothetical protein7e-47187
NC_011741:2155947:2169089216908921701921104Escherichia coli IAI1 chromosome, complete genomehypothetical protein4e-40165
CU928160:2155947:2169089216908921701921104Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein4e-40165
NC_008740:2905990:2944596294459629456721077Marinobacter aquaeolei VT8, complete genomehypothetical protein2e-32139
NC_010334:1783500:1795614179561417967231110Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein2e-32139
NC_003228:3212500:3254415325441532555091095Bacteroides fragilis NCTC 9343, complete genomehypothetical protein5e-27122
NC_009430:16500:2957429574321772604Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, completehypothetical protein1e-26120
NC_013530:3204825:321587232158723216861990Xylanimonas cellulosilytica DSM 15894, complete genomehypothetical protein2e-26119
NC_015500:533528:5440725440725452021131Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein7e-26118
NC_013173:2884887:2904551290455129057021152Desulfomicrobium baculatum DSM 4028, complete genomehypothetical protein3e-25116
NC_016627:3295008:3295008329500832961831176Clostridium clariflavum DSM 19732 chromosome, complete genomePolysaccharide pyruvyl transferase9e-25114
NC_015578:1633393:1648485164848516514032919Treponema primitia ZAS-2 chromosome, complete genome2-oxoglutarate decarboxylase4e-24112
NC_015067:459626:4709034709034720001098Bifidobacterium longum subsp. longum JCM 1217, complete genomehypothetical protein2e-23110
NC_015500:2417041:2426909242690924280931185Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein8e-23108
NC_009614:3081190:3081190308119030822871098Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein1e-21103
NC_015977:2631789:2658807265880726610712265Roseburia hominis A2-183 chromosome, complete genomecoenzyme F420 hydrogenase/dehydrogenase subunit beta domain containing protein2e-20100
NC_006347:3166000:3191455319145531925551101Bacteroides fragilis YCH46, complete genomehypothetical protein2e-20100
NC_017221:1763914:1795048179504817962111164Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein2e-2099.8
NC_015052:471944:4793794793794805301152Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein4e-2099
NC_015164:3210885:3222712322271232237791068Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein4e-1995.9
NC_017221:1763914:1799397179939718005421146Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein7e-1994.7
NC_014656:1161188:1181674118167411828191146Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein1e-1894.4
NC_013714:2086526:2103351210335121044781128Bifidobacterium dentium Bd1, complete genomePolysaccharide pyruvyl transferase1e-1894
NC_008618:1729739:1740832174083217419411110Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein2e-1893.6
NC_014973:2693672:2707283270728327083861104Geobacter sp. M18 chromosome, complete genomehypothetical protein7e-1891.7
NC_010468:1775000:1787581178758117886841104Escherichia coli ATCC 8739, complete genomehypothetical protein6e-1788.6
NC_015164:4023881:4037036403703640381331098Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein1e-1687.8
NC_010001:4520979:4522254452225445233541101Clostridium phytofermentans ISDg, complete genomehypothetical protein4e-1685.9
NC_006448:957830:973462973462974313852Streptococcus thermophilus LMG 18311, complete genomehypothetical protein5e-1685.5
NC_017068:2436960:2485273248527324863851113Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-1584.3
NC_018604:1556425:1570779157077915733912613Brachyspira pilosicoli WesB complete genomecoenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein1e-1584.3
NC_018607:1313035:1318516131851613211432628Brachyspira pilosicoli B2904 chromosome, complete genomecoenzyme F420 hydrogenase1e-1584.3
NC_014387:993013:1000404100040410015401137Butyrivibrio proteoclasticus B316 chromosome 1, complete genomehypothetical protein4e-1582.8
NC_009092:1599526:1622440162244016235701131Shewanella loihica PV-4, complete genomehypothetical protein3e-1479.7
NC_015500:2112975:2132372213237221334721101Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein1e-1274.3
NC_017243:1652000:1666877166687716691442268Brachyspira intermedia PWS/A chromosome, complete genomecoenzyme F420 hydrogenase3e-1272.8
NC_015500:1923514:1953578195357819546241047Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein2e-1170.5
NC_015437:27325:4983249832508901059Selenomonas sputigena ATCC 35185 chromosome, complete genomepolysaccharide pyruvyl transferase4e-1169.3
NC_015389:1375315:1386086138608613871921107Coriobacterium glomerans PW2 chromosome, complete genomehypothetical protein2e-1067
NC_015172:1621223:1635004163500416360741071Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein4e-1065.9
NC_017243:1652000:1669361166936116715862226Brachyspira intermedia PWS/A chromosome, complete genomecoenzyme F420 hydrogenase8e-0961.6