Pre_GI Gene

Some Help

Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:4520979 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
45209794521860882glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
452225445233541101hypothetical proteinBLASTP
45240104524876867fructose-16-bisphosphate aldolase class IIQuickGO ontologyBLASTP
45250184525221204hypothetical protein
45254704526369900phosphoesterase PA-phosphatase relatedQuickGO ontologyBLASTP
452662645303933768DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
453041545342513837DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
453509945377322634ATPase P-type transporting HAD superfamily subfamily ICQuickGO ontologyBLASTP
453786745390541188major facilitator superfamily MFS_1QuickGO ontologyBLASTP
45393784539740363ribosomal protein L7L12QuickGO ontologyBLASTP
45398174540311495ribosomal protein L10QuickGO ontologyBLASTP
45406034541295693ribosomal protein L1QuickGO ontologyBLASTP
45413544541782429ribosomal protein L11QuickGO ontologyBLASTP
45419134542431519NusG antitermination factorQuickGO ontologyBLASTP
45424514542681231preprotein translocase SecE subunitQuickGO ontology
45427314542880150ribosomal protein L33QuickGO ontologyBLASTP