Pre_GI: BLASTP Hits

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Query: NC_013410:2519441:2541421 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2541421, End: 2541984, Length: 564

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015975:558523:575675575675576241567Lactobacillus ruminis ATCC 27782 chromosome, complete genomehypothetical protein4e-56217
NC_015578:3914189:392148439214843921963480Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein3e-1271.6
NC_015160:1117371:113476611347661135248483Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein8e-1270.1
NC_015311:24071:304123041230885474Prevotella denticola F0289 chromosome, complete genomehypothetical protein7e-1167
NC_015311:510661:521497521497521976480Prevotella denticola F0289 chromosome, complete genomehypothetical protein8e-1063.5
NC_015578:3495034:350088935008893501371483Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein3e-0961.6
NC_014387:2661496:269236926923692692929561Butyrivibrio proteoclasticus B316 chromosome 1, complete genomehypothetical protein4e-0857.8
NC_013410:1591500:159624415962441596723480Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein9e-0856.6
NC_017068:1143515:117075411707541171230477Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-0652.8
NC_019968:1194489:120676812067681207280513Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein3e-0652