Pre_GI: BLASTP Hits

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Query: NC_013410:2519441:2536648 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2536648, End: 2537607, Length: 960

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009615:2184300:2198060219806021990611002Parabacteroides distasonis ATCC 8503 chromosome, complete genomepolysaccharide pyruvyl transferase YvfF2e-58226
NC_009615:1627961:163971016397101640675966Parabacteroides distasonis ATCC 8503 chromosome, complete genomeexopolysaccharide biosynthesis protein galactosyltransferase5e-50198
NC_015663:4950000:498730249873024988249948Enterobacter aerogenes KCTC 2190 chromosome, complete genomepolysaccharide pyruvyl transferase yvff3e-30132
NC_007952:1453000:146307014630701464023954Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein5e-30131
NC_020064:1547524:156871615687161569672957Serratia marcescens FGI94, complete genomeexopolysaccharide biosynthesis protein3e-28125
NC_011369:3022235:3028613302861330296441032Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completepolysaccharide pyruvyl transferase6e-27121
NC_016513:1958500:198484619848461985802957Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completepolysaccharide pyruvyl transferase YvfF8e-26117
NC_013416:1621469:164690616469061647862957Aggregatibacter actinomycetemcomitans D11S-1, complete genomepolysaccharide pyruvyl transferase YvfF3e-25115
NC_015675:6276357:6302623630262363036391017Mesorhizobium opportunistum WSM2075 chromosome, complete genomepolysaccharide pyruvyl transferase2e-24113
NC_019973:5650646:5676912567691256779281017Mesorhizobium australicum WSM2073, complete genomeexopolysaccharide biosynthesis protein2e-24113
NC_011283:1690193:170310417031041704054951Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein8e-22104
NC_008702:3580380:3590109359010935911521044Azoarcus sp. BH72, complete genomepolysaccharide polymerase7e-21101
NC_015172:1621223:1637423163742316394712049Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeglycosyl transferase family 28e-1581.3
NC_016023:3391116:3397366339736633983971032Bacillus coagulans 36D1 chromosome, complete genomepolysaccharide pyruvyl transferase9e-1477.8
NC_020304:3751710:3767741376774137687661026Desulfocapsa sulfexigens DSM 10523, complete genomeexopolysaccharide biosynthesis protein9e-1374.7
NC_008781:3365468:338587733858773386767891Polaromonas naphthalenivorans CJ2, complete genomeExopolysaccharide biosynthesis protein-like protein7e-1065.1
NC_020207:843822:8511858511858523061122Enterococcus faecium NRRL B-2354, complete genomeYveS1e-0963.9
NC_015152:272500:2957242957242968241101Spirochaeta sp. Buddy chromosome, complete genomepolysaccharide pyruvyl transferase2e-0757.4
NC_012804:2017531:202625120262512027210960Thermococcus gammatolerans EJ3, complete genomehypothetical protein6e-0755.5