Pre_GI: BLASTP Hits

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Query: NC_013410:2519441:2535848 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2535848, End: 2536603, Length: 756

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016026:1224129:124369712436971244464768Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein2e-40166
NC_013166:1341575:134851313485131349286774Kangiella koreensis DSM 16069, complete genomehypothetical protein3e-39162
NC_010831:931961:944505944505945272768Chlorobium phaeobacteroides BS1, complete genomehypothetical protein5e-39161
NC_007963:1190847:121955512195551220331777Chromohalobacter salexigens DSM 3043, complete genomehypothetical protein3e-28125
NC_014532:2664139:269988126998812700657777Halomonas elongata DSM 2581, complete genomehypothetical protein9e-28124
NC_009720:464078:479819479819480607789Xanthobacter autotrophicus Py2, complete genomehypothetical protein3e-26119
NC_019968:175480:185222185222185983762Prevotella dentalis DSM 3688 chromosome 2, complete sequenceProtein of unknwon function (DUF2893)4e-25115
NC_008686:1960034:196747319674731968294822Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein1e-23110
NC_015164:3997743:399774339977433998504762Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein1e-22106
NC_015311:1860666:190117719011771901941765Prevotella denticola F0289 chromosome, complete genomehypothetical protein1e-21103
NC_003902:3666544:369397736939773694735759Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein1e-21103
NC_007086:1224867:125306112530611253819759Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein1e-21103
NC_008825:2564965:256703325670332567860828Methylibium petroleiphilum PM1, complete genomehypothetical protein3e-2099
NC_011662:1017933:102518310251831025941759Thauera sp. MZ1T, complete genomehypothetical protein2e-1996.3
NC_010554:2646806:269339726933972694230834Proteus mirabilis HI4320, complete genomeplasmid-related protein1e-1893.6
NC_008322:373531:388584388584389369786Shewanella sp. MR-7, complete genomehypothetical protein2e-1892.8
NC_010623:1871492:188086618808661881597732Burkholderia phymatum STM815 chromosome 2, complete sequencehypothetical protein5e-1891.3
NC_013716:3708415:371933737193373720140804Citrobacter rodentium ICC168, complete genomehypothetical protein1e-1687
NC_005125:4557889:457146645714664572248783Gloeobacter violaceus PCC 7421, complete genomehypothetical protein3e-1685.9
NC_009665:2352528:237053323705332371321789Shewanella baltica OS185 chromosome, complete genomehypothetical protein2e-1582.8
NC_010622:249625:297155297155297871717Burkholderia phymatum STM815 chromosome 1, complete sequencehypothetical protein2e-1169.3
NC_014540:2828299:284792128479212848658738Burkholderia sp. CCGE1003 chromosome 2, complete sequencehypothetical protein3e-1168.9
NC_007952:3283394:331477333147733315504732Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein4e-1168.6
NC_007951:925442:933365933365934096732Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein3e-1065.9
NC_015458:2338437:235494123549412355519579Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein8e-1064.3