Pre_GI: BLASTP Hits

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Query: NC_013410:2037840:2046338 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2046338, End: 2047246, Length: 909

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011961:85083:902159021591165951Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencehypothetical protein5e-2098.6
NC_016935:7872425:789848078984807899358879Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein5e-1995.1
NC_016631:4113794:415949941594994160488990Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein2e-1583.2
NC_004547:3207776:321632432163243217214891Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-1375.5
NC_017059:2491924:250812225081222509042921Rhodospirillum photometricum DSM 122, complete genomehypothetical protein5e-1272
NC_016613:1159980:116672511667251167684960Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein2e-1170.1
NC_008758:143907:147500147500148423924Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completehypothetical protein3e-1169.3
NC_015573:569625:577280577280578209930Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein5e-1168.6
NC_018870:1695588:172290817229081723849942Thermacetogenium phaeum DSM 12270 chromosome, complete genomehypothetical protein6e-1168.2
NC_013929:3722867:3759932375993237610381107Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1067.8
NC_013222:615948:640346640346641242897Robiginitalea biformata HTCC2501, complete genomehypothetical protein8e-1167.8
NC_013093:626473:6529436529436540611119Actinosynnema mirum DSM 43827, complete genomehypothetical protein6e-1065.1
NC_008596:1302000:1315709131570913167821074Mycobacterium smegmatis str. MC2 155, complete genomehypothetical protein1e-0964.3
NC_013956:595320:603256603256604218963Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein9e-0961.2
NC_008825:1258500:126415512641551265090936Methylibium petroleiphilum PM1, complete genomehypothetical protein1e-0860.8
NC_011662:2374955:239258423925842393507924Thauera sp. MZ1T, complete genomehypothetical protein2e-0860.1
NC_014820:582443:624965624965625906942Cenarchaeum symbiosum A, complete genomehypothetical protein1e-0757.4
NC_014394:738365:742526742526743449924Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein2e-0653.5
NC_014033:1215790:123432212343221235206885Prevotella ruminicola 23 chromosome, complete genomehypothetical protein2e-0653.1