Pre_GI: BLASTP Hits

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Query: NC_013410:1953293:1966669 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1966669, End: 1967787, Length: 1119

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015571:1265121:1280214128021412813861173Porphyromonas gingivalis TDC60, complete genomehypothetical protein2e-53210
NC_010729:225616:2256162256162267881173Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein2e-53209
NC_014008:3296708:3313424331342433145421119Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeAAA ATPase2e-33143
NC_017095:119361:1390311390311401491119Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeputative ATPase (AAA+ superfamily)5e-26119
NC_009454:136468:1376781376781387931116Pelotomaculum thermopropionicum SI, complete genomeATPase4e-1686.3
NC_019791:570923:5802885802885813431056Caldisphaera lagunensis DSM 15908 chromosome, complete genomeATPase (AAA+ superfamily)1e-1171.2
NC_015474:487517:5004305004305016951266Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein3e-1169.7
NC_009376:446224:4545144545144556471134Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeATPase8e-0961.6
NC_016885:1587477:1599612159961216007451134Pyrobaculum oguniense TE7 chromosome, complete genomeputative ATPase (AAA+ superfamily)4e-0859.3
NC_010482:841609:8595068595068605461041Candidatus Korarchaeum cryptofilum OPF8, complete genomeATPase5e-0755.8
NC_009051:1074993:1099623109962311008101188Methanoculleus marisnigri JR1, complete genomeATPase2e-0653.9