Pre_GI: BLASTP Hits

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Query: NC_013410:1651000:1683330 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1683330, End: 1683833, Length: 504

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014033:395000:417713417713418213501Prevotella ruminicola 23 chromosome, complete genomehypothetical protein6e-39159
NC_013406:7024149:704578270457827046336555Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein5e-31133
NC_013595:2592590:259594225959422596520579Streptosporangium roseum DSM 43021, complete genomehypothetical protein1e-25115
NC_015578:1038588:105866410586641059272609Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein3e-25114
NC_014150:446359:461020461020461811792Brachyspira murdochii DSM 12563 chromosome, complete genomehypothetical protein6e-24110
NC_013730:2187898:219812721981272198675549Spirosoma linguale DSM 74, complete genomehypothetical protein1e-23108
NC_014666:8459724:847269784726978473290594Frankia sp. EuI1c chromosome, complete genomeConserved hypothetical protein CHP024641e-21102
NC_015410:1324313:134432013443201344883564Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-21102
NC_010379:110760:132248132248132553306Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequencehypothetical protein2e-0858.2
NC_014643:1251847:126494012649401265392453Rothia dentocariosa ATCC 17931 chromosome, complete genomeswarming motility protein YbiA1e-0755.5
NC_015737:1976000:199784119978411998479639Clostridium sp. SY8519, complete genomehypothetical protein4e-0650.8