Pre_GI: BLASTP Hits

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Query: NC_013410:1651000:1676084 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1676084, End: 1676743, Length: 660

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015873:2260048:227489422748942275556663Megasphaera elsdenii DSM 20460, complete genomeradical SAM domain protein1e-57222
NC_009089:428075:463846463846464442597Clostridium difficile 630, complete genomeRadical SAM-superfamily protein1e-35149
NC_017179:446564:448212448212448808597Clostridium difficile BI1, complete genomeradical SAM protein1e-35149
NC_013315:435599:438649438649439245597Clostridium difficile CD196 chromosome, complete genomeradical SAM protein1e-35149
NC_016894:77853:804098040981002594Acetobacterium woodii DSM 1030 chromosome, complete genomehypothetical protein2e-34145
NC_014624:828943:846126846126846743618Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein5e-32137
NC_007907:5404608:542126254212625421645384Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-1890.5