Pre_GI: BLASTP Hits

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Query: NC_013410:1651000:1675252 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1675252, End: 1676082, Length: 831

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010723:3133302:314770531477053148535831Clostridium botulinum E3 str. Alaska E43, complete genomepyridoxine kinase2e-83308
NC_015873:2260048:227560122756012276422822Megasphaera elsdenii DSM 20460, complete genomeputative pyridoxal kinase4e-71268
NC_010520:1586000:158637315863731587209837Clostridium botulinum A3 str. Loch Maree, complete genomepyridoxine kinase2e-42172
NC_019960:1524338:152598215259821526800819Prevotella dentalis DSM 3688 chromosome 1, complete sequencepyridoxal/pyridoxine/pyridoxamine kinase1e-38160
NC_017243:1323870:134217313421731342988816Brachyspira intermedia PWS/A chromosome, complete genomepyridoxamine kinase1e-28127
NC_012225:236490:253308253308254117810Brachyspira hyodysenteriae WA1, complete genomepyridoxamine kinase4e-27122
NC_012108:481657:497063497063497881819Desulfobacterium autotrophicum HRM2, complete genomeputative bifunctional enzyme ThiED (Thiamine-phosphate pyrophosphorylase / Phosphomethylpyrimidine kinase)3e-0859.3
NC_016614:1543333:155662815566281557485858Vibrio sp. EJY3 chromosome 2, complete sequencepyridoxamine kinase4e-0858.9
NC_016628:537137:567998567998568858861Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephosphomethylpyrimidine kinase6e-0858.2
NC_009513:1065704:106570410657041066543840Lactobacillus reuteri F275, complete genomephosphomethylpyrimidine kinase2e-0756.6
NC_014804:401313:4224084224084237571350Thermococcus barophilus MP chromosome, complete genomephosphomethylpyrimidine kinase5e-0755.1
NC_016513:1400899:140376114037611404618858Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completepyridoxal kinase9e-0754.3
NC_013416:1091432:109557910955791096436858Aggregatibacter actinomycetemcomitans D11S-1, complete genomepyridoxal kinase1e-0653.9
NC_013457:979102:994942994942995802861Vibrio sp. Ex25 chromosome 2, complete genomephosphomethylpyrimidine kinase2e-0653.5
NC_003450:3266604:328739132873913288191801Corynebacterium glutamicum ATCC 13032, complete genomephosphomethylpyrimidine kinase2e-0653.1
NC_008593:1917118:192112919211291921932804Clostridium novyi NT, complete genomephosphomethylpyrimidine kinase6e-0651.6
NC_009138:2242470:226103722610372261828792Herminiimonas arsenicoxydans, complete genomebifunctional protein: Includes: hydroxy-methylpyrimidine kinase (HMP kinase); hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase)1e-0550.8