Pre_GI: BLASTP Hits

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Query: NC_013410:1203937:1212409 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1212409, End: 1213227, Length: 819

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009615:1469642:149655214965521497304753Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein1e-32140
NC_015500:900807:918674918674919435762Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyltransferase sugar-binding region containing DXD motif2e-32139
NC_013410:2519441:253027625302762531043768Fibrobacter succinogenes subsp. succinogenes S85 chromosome,glycosyltransferase family protein8e-29127
NC_012778:263241:2872322872322883591128Eubacterium eligens ATCC 27750, complete genomehypothetical protein7e-28124
NC_003454:1889529:189787118978711898602732Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeHypohetical Teichoic Acid Biosynthesis Protein8e-28124
NC_015577:1794560:181437818143781815148771Treponema azotonutricium ZAS-9 chromosome, complete genomeglycosyltransferase1e-27123
NC_020207:843822:855454855454856185732Enterococcus faecium NRRL B-2354, complete genomepolysaccharide biosynthesis protein CpsM1e-26120
NC_015500:2417041:242808324280832428868786Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyltransferase sugar-binding region containing DXD motif1e-26120
NC_015578:247266:259142259142259918777Treponema primitia ZAS-2 chromosome, complete genomeglycosyltransferase family 327e-26117
NC_006448:957830:969982969982970722741Streptococcus thermophilus LMG 18311, complete genomeexopolysaccharide biosynthesis protein, glycosyltransferase2e-25116
NC_008529:1663000:168412816841281684850723Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeMannosyltransferase OCH1 related enzyme3e-25115
NC_019904:3072241:307807230780723078809738Echinicola vietnamensis DSM 17526 chromosome, complete genomemannosyltransferase OCH1-like enzyme4e-25115
NC_020995:2636519:263981726398172640443627Enterococcus casseliflavus EC20, complete genomehypothetical protein3e-23108
NC_014033:1691822:1703233170323317044141182Prevotella ruminicola 23 chromosome, complete genomeglycosyl transferase family protein2e-22106
NC_014387:2661496:2668356266835626694741119Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeglycosyl transferase1e-1996.7