Pre_GI: BLASTP Hits

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Query: NC_013199:392450:416281 Lactobacillus rhamnosus Lc 705, complete genome

Start: 416281, End: 417558, Length: 1278

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014655:379937:3840453840453854241380Leadbetterella byssophila DSM 17132 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein6e-35148
NC_012850:3454270:3457639345763934590331395Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeFAD dependent oxidoreductase8e-24112
NC_013406:3926531:3937362393736239387381377Paenibacillus sp. Y412MC10 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein1e-23111
NC_014217:4550544:4566507456650745678741368Starkeya novella DSM 506 chromosome, complete genomeFAD dependent oxidoreductase2e-23110
NC_015555:2259500:2302591230259123045041914Thermoanaerobacterium xylanolyticum LX-11 chromosome, completethiamine biosynthesis Thi4 protein4e-23109
NC_008596:4043213:4058087405808740594601374Mycobacterium smegmatis str. MC2 155, complete genomeFAD dependent oxidoreductase7e-22105
NC_019970:2551607:2576469257646925783821914Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeThi4 family1e-21104
NC_008578:591357:5991235991236004601338Acidothermus cellulolyticus 11B, complete genomefumarate reductase/succinate dehydrogenase flavoprotein8e-2098.6
NC_015577:2508027:2521033252103325223701338Treponema azotonutricium ZAS-9 chromosome, complete genomeinvasion protein IbeA3e-1687
NC_015589:3711821:3711821371182137138782058Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeglucose-inhibited division protein A4e-1686.3
NC_003911:1749467:1754354175435417557151362Silicibacter pomeroyi DSS-3, complete genomeinvasion protein IbeA2e-1480.9
NC_015577:2508027:2518058251805825193981341Treponema azotonutricium ZAS-9 chromosome, complete genomeinvasion protein IbeA3e-1480.1
NC_013740:1178370:1201573120157312028291257Acidaminococcus fermentans DSM 20731, complete genomeHI0933 family protein3e-1273.2
NC_015577:2508027:2519660251966025209911332Treponema azotonutricium ZAS-9 chromosome, complete genomeinvasion protein IbeA5e-1272.8
NC_010498:4967724:4979543497954349809131371Escherichia coli SMS-3-5, complete genomeinvasion protein IbeA3e-0963.5
NC_010498:4967724:4969010496901049703741365Escherichia coli SMS-3-5, complete genomedihydrolipoamide dehydrogenase CglE1e-0861.2
NC_013037:5395951:5400857540085754025631707Dyadobacter fermentans DSM 18053, complete genomehypothetical protein3e-0756.6
NC_008525:606986:6069866069866092292244Pediococcus pentosaceus ATCC 25745, complete genomePyridine nucleotide-disulphide oxidoreductase4e-0756.2
NC_014364:3286459:3301146330114633026151470Spirochaeta smaragdinae DSM 11293 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-0654.7