Pre_GI: BLASTP Hits

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Query: NC_013198:2088780:2106596 Lactobacillus rhamnosus GG, complete genome

Start: 2106596, End: 2107516, Length: 921

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010999:2155714:217242421724242173353930Lactobacillus casei, complete genomeWzd3e-116418
NC_013199:2058857:207850320785032079417915Lactobacillus rhamnosus Lc 705, complete genomecapsular exopolysaccharide biosynthesis protein (Wzd) / Chain length regulator8e-111400
NC_014334:1954333:197281419728141973728915Lactobacillus casei str. Zhang chromosome, complete genomeWzd1e-108392
NC_018528:1806761:180833618083361809223888Lactobacillus helveticus R0052 chromosome, complete genomeTyrosine-protein kinase transmembrane modulator Wzd3e-39162
NC_015975:99500:100797100797101585789Lactobacillus ruminis ATCC 27782 chromosome, complete genomeExopolysaccharide chain length regulator1e-33144
NC_008529:1663000:168813416881341689018885Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCapsular polysaccharide biosynthesis protein1e-33144
NC_015420:35384:506755067551532858Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, completelipopolysaccharide biosynthesis protein3e-33142
NC_010610:107500:109802109802110572771Lactobacillus fermentum IFO 3956, complete genomehypothetical protein3e-31135
NC_014727:1877764:190350219035021904389888Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,capsular polysaccharide biosynthesis protein3e-31135
NC_008525:606986:620780620780621565786Pediococcus pentosaceus ATCC 25745, complete genomeCapsular polysaccharide biosynthesis protein8e-31134
NC_008054:1649160:167917216791721680011840Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIB, Hypothetical protein3e-27122
NC_004567:1089231:109091110909111091681771Lactobacillus plantarum WCFS1, complete genomeexopolysaccharide biosynthesis protein2e-22106
NC_015634:359500:362790362790363527738Bacillus coagulans 2-6 chromosome, complete genomelipopolysaccharide biosynthesis protein2e-21103
NC_020207:843822:844782844782845561780Enterococcus faecium NRRL B-2354, complete genomeTyrosine-protein kinase transmembrane modulator EpsC5e-1685.5
NC_014206:3468500:349117734911773491920744Geobacillus sp. C56-T3 chromosome, complete genomelipopolysaccharide biosynthesis protein6e-1685.1
NC_020995:1205524:120971512097151210494780Enterococcus casseliflavus EC20, complete genomelipopolysaccharide biosynthesis protein5e-1685.1
NC_012793:3275751:330404833040483304791744Geobacillus sp. WCH70, complete genomelipopolysaccharide biosynthesis protein2e-1583.6
NC_020272:430500:430859430859431605747Bacillus amyloliquefaciens IT-45, complete genomeputative capsular polysaccharide biosynthesis protein ywqC2e-1583.6
NC_014479:3510972:352662235266223527368747Bacillus subtilis subsp. spizizenii str. W23 chromosome, completemodulator of YwqD protein tyrosine kinase activity6e-1478.2
NC_021171:4519495:453467145346714535417747Bacillus sp. 1NLA3E, complete genomelipopolysaccharide biosynthesis protein2e-1377
NC_017191:3483231:350008535000853500831747Bacillus amyloliquefaciens XH7 chromosome, complete genomemodulator of YwqD protein tyrosine kinase activity4e-1375.5
NC_017190:3528229:354524435452443545990747Bacillus amyloliquefaciens LL3 chromosome, complete genometransmembrane modulator of PtkA activity, activates PtkA autophosphorylation and substrate phosphorylation4e-1375.5
NC_017188:3482500:349842234984223499168747Bacillus amyloliquefaciens TA208 chromosome, complete genometransmembrane modulator of PtkA activity, activates PtkA autophosphorylation and substrate phosphorylation4e-1375.5
NC_014551:3515462:353125035312503531996747Bacillus amyloliquefaciens DSM 7, complete genometransmembrane modulator of PtkA activity, activates PtkA autophosphorylation and substrate phosphorylation5e-1375.1
NC_009725:3447336:346515134651513465897747Bacillus amyloliquefaciens FZB42, complete genomeYwqC4e-1272.4
NC_020410:3440327:345928834592883460034747Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completemodulator of YwqD protein tyrosine kinase activity3e-1169.7
NC_012914:469117:473009473009473773765Paenibacillus sp. JDR-2, complete genomelipopolysaccharide biosynthesis protein3e-1169.7
NC_018867:1161648:117757611775761178253678Dehalobacter sp. CF chromosome, complete genomelipopolysaccharide biosynthesis1e-1067.8
NC_016584:5388500:539051653905165391214699Desulfosporosinus orientis DSM 765 chromosome, complete genomecapsular polysaccharide biosynthesis protein1e-0757.8
NC_006448:957830:979380979380980072693Streptococcus thermophilus LMG 18311, complete genomeexopolysaccharide exporter accessory protein2e-0756.6
NC_014219:3254268:328837232883723289118747Bacillus selenitireducens MLS10 chromosome, complete genomelipopolysaccharide biosynthesis protein3e-0653.1