Pre_GI: BLASTP Hits

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Query: NC_013198:1538792:1566292 Lactobacillus rhamnosus GG, complete genome

Start: 1566292, End: 1567071, Length: 780

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015930:18969:335063350634264759Lactococcus garvieae ATCC 49156, complete genomeDNA repair protein3e-45182
NC_013928:9494:286162861629371756Streptococcus mutans NN2025, complete genomeDNA repair protein4e-45181
NC_012924:29353:285742857429356783Streptococcus suis SC84, complete genomeDNA repair protein RecO5e-44177
NC_009443:29349:285702857029352783Streptococcus suis 98HAH33, complete genomeDNA repair protein RecO5e-44177
NC_012925:29353:285742857429356783Streptococcus suis P1/7, complete genomeDNA repair protein RecO5e-44177
NC_006449:5046:306133061331386774Streptococcus thermophilus CNRZ1066, complete genomeDNA repair protein RecO3e-43175
NC_006448:5046:305853058531358774Streptococcus thermophilus LMG 18311, complete genomeDNA repair protein RecO3e-43175
NC_006322:2592176:261616126161612616931771Bacillus licheniformis ATCC 14580, complete genomeDNA repair protein RecO6e-36150
NC_008054:1030994:105946210594621060211750Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeDNA repair protein RecO (Recombination protein O)3e-33142
NC_008529:1042220:107777910777791078528750Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeRecombinational DNA repair protein RecO2e-33142
NC_016771:4059445:406018540601854060931747Bacillus cereus NC7401, complete genomerecombination protein O2e-27122
NC_011969:4001489:400148940014894002262774Bacillus cereus Q1 chromosome, complete genomeDNA repair protein reco2e-27122
NC_020291:1014333:103523810352381035987750Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeDNA repair protein RecO2e-1376.3
NC_009633:3055413:305776730577673058507741Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA repair protein RecO5e-1375.1
NC_011999:1320159:132158613215861322341756Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein8e-1374.3
NC_021182:2219286:221928622192862220032747Clostridium pasteurianum BC1, complete genomeDNA repair protein RecO3e-1065.9