Pre_GI: BLASTP Hits

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Query: NC_013198:1538792:1544690 Lactobacillus rhamnosus GG, complete genome

Start: 1544690, End: 1545109, Length: 420

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010471:1081590:109705510970551097471417Leuconostoc citreum KM20, complete genomePutative head-tail joining protein3e-1993.6
NC_012984:1027898:104600110460011046408408Lactobacillus plantarum JDM1, complete genomehypothetical protein2e-1890.9
NC_014136:329484:347226347226347639414Leuconostoc kimchii IMSNU11154 chromosome, complete genomeprophage pi3 protein 191e-1581.6
NC_010610:535790:558569558569559120552Lactobacillus fermentum IFO 3956, complete genomehypothetical protein4e-1373.6
NC_015428:1544728:156849415684941568892399Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage protein, HK97 gp10 family1e-1271.6
NC_002662:447236:470085470085470570486Lactococcus lactis subsp. lactis Il1403, complete genomeprophage pi1 protein 403e-0650.4