Pre_GI: BLASTP Hits

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Query: NC_013198:1538792:1543677 Lactobacillus rhamnosus GG, complete genome

Start: 1543677, End: 1544312, Length: 636

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013656:1549634:156305015630501563664615Lactococcus lactis subsp. lactis KF147, complete genomephage tail component1e-33143
NC_015428:1544728:156741815674181568104687Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage major tail protein8e-31133
NC_002662:1418970:143172614317261432319594Lactococcus lactis subsp. lactis Il1403, complete genomemajor tail protein2e-30132
NC_014727:1220869:123789412378941238538645Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,major tail protein1e-25116
NC_010471:1081590:109603010960301096680651Leuconostoc citreum KM20, complete genomePutative major tail protein6e-21100
NC_012984:1027898:104680310468031047444642Lactobacillus plantarum JDM1, complete genomehypothetical protein3e-1995.1
NC_014136:329484:346207346207346848642Leuconostoc kimchii IMSNU11154 chromosome, complete genomesmall major structural protein5e-1890.9
NC_010610:535790:559503559503560126624Lactobacillus fermentum IFO 3956, complete genomehypothetical protein3e-0651.6