Pre_GI: BLASTP Hits

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Query: NC_012967:3012317:3032811 Escherichia coli B str. REL606 chromosome, complete genome

Start: 3032811, End: 3033182, Length: 372

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:3511600:353004035300403530411372Escherichia coli ED1a chromosome, complete genomeputative GspI-like type II secretion protein6e-56215
NC_011751:3530954:355566735556673556038372Escherichia coli UMN026 chromosome, complete genomeputative type II secretion protein3e-54209
NC_008253:3161311:320066232006623201033372Escherichia coli 536, complete genomehypothetical type II secretion protein GspI6e-54208
NC_011740:2986514:298877329887732989144372Escherichia fergusonii ATCC 35469, complete genomeputative type II secretion protein (GspI-like)8e-54208
NC_010498:3291344:331399433139943314365372Escherichia coli SMS-3-5, complete genomegeneral secretion pathway protein GspI2e-53207
NC_011601:3338888:337146833714683371839372Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype II secretion protein2e-53207
NC_011750:3584000:360356136035613603932372Escherichia coli IAI39 chromosome, complete genomeputative GspI-like type II secretion protein2e-53207
NC_011742:3277941:329723032972303297601372Escherichia coli S88 chromosome, complete genometype II secretion protein (GspI-like)7e-53205
NC_008563:3362058:338243833824383382809372Escherichia coli APEC O1, complete genomeputative type II secretion protein GspI7e-53205
NC_007946:3289151:330953133095313309902372Escherichia coli UTI89, complete genomehypothetical type II secretion protein GspI7e-53205
NC_013364:3701895:376292837629283763299372Escherichia coli O111:H- str. 11128, complete genomeputative type II secretion protein GspI2e-52204
NC_020064:3998715:405514340551434055511369Serratia marcescens FGI94, complete genomegeneral secretion pathway protein I6e-1372.8
NC_011663:180889:183173183173183541369Shewanella baltica OS223 chromosome, complete genomegeneral secretion pathway protein I6e-0752.8