Pre_GI: BLASTP Hits

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Query: NC_012917:3241196:3292938 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3292938, End: 3294515, Length: 1578

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:3235911:3239778323977832413521575Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeiron(III) ABC transporter, permease protein sfuB3e-151535
NC_009921:6421387:6435823643582364373521530Frankia sp. EAN1pec, complete genomebinding-protein-dependent transport systems inner membrane component3e-92339
NC_017514:1568591:1594301159430115958181518Neisseria meningitidis M01-240149 chromosome, complete genomeiron(III) ABC transporter permease4e-52206
NC_014654:2277461:2281523228152322831541632Halanaerobium sp. 'sapolanicus' chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-45184
NC_009633:4733678:4742874474287447445501677Alkaliphilus metalliredigens QYMF chromosome, complete genomebinding-protein-dependent transport system inner membrane protein2e-32140
NC_012032:398419:4134624134624151861725Chloroflexus sp. Y-400-fl, complete genomebinding-protein-dependent transport systems inner membrane component1e-1998.2
NC_010175:398453:4134964134964152201725Chloroflexus aurantiacus J-10-fl, complete genomebinding-protein-dependent transport systems inner membrane component2e-1997.8
NC_013173:815696:8167548167548184061653Desulfomicrobium baculatum DSM 4028, complete genomebinding-protein-dependent transport systems inner membrane component6e-1789.4
NC_017506:1507943:1530464153046415320771614Marinobacter adhaerens HP15 chromosome, complete genomeiron(III) ABC transporter permease2e-1274.7
NC_012880:3748665:3784062378406237857741713Dickeya dadantii Ech703, complete genomebinding-protein-dependent transport systems inner membrane component3e-1273.6
NC_015581:1891409:1909668190966819112901623Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeABC transporter integral membrane subunit5e-1169.7
NC_014153:2187409:2192572219257221942301659Thiomonas intermedia K12 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component8e-1168.9
NC_014166:2649444:2665798266579826673751578Arcobacter nitrofigilis DSM 7299 chromosome, complete genomebinding-protein-dependent transporter inner membrane component3e-1067
NC_007643:889755:9053179053179069931677Rhodospirillum rubrum ATCC 11170, complete genomeBinding-protein-dependent transport systems inner membrane component3e-1067
NC_013524:969038:983292983292984143852Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomebinding-protein-dependent transport systems inner membrane component1e-0965.1
NC_012225:1015452:1026109102610910277581650Brachyspira hyodysenteriae WA1, complete genomeputative permease BitE3e-0963.9
NC_013421:3237633:3251882325188232535791698Pectobacterium wasabiae WPP163, complete genomebinding-protein-dependent transport systems inner membrane component2e-0861.2
NC_020418:1397112:1404802140480214063911590Morganella morganii subsp. morganii KT, complete genomeFerric iron ABC transporter, permease protein2e-0860.8
NC_014166:2149984:216710021671002167924825Arcobacter nitrofigilis DSM 7299 chromosome, complete genomebinding-protein-dependent transporter inner membrane component4e-0860.1
NC_009012:1901492:1916130191613019177851656Clostridium thermocellum ATCC 27405, complete genomebinding-protein-dependent transport systems inner membrane component5e-0859.7
NC_000961:135493:134750134750135496747Pyrococcus horikoshii OT3, complete genometransport system protein1e-0758.9
NC_019673:895418:906454906454907299846Saccharothrix espanaensis DSM 44229 complete genomeABC-type transporter, permease subunit1e-0758.5
NC_011985:194973:210700210700211488789Agrobacterium radiobacter K84 chromosome 1, complete genomespermidine/putrescine ABC transporter1e-0758.5
NC_008314:477722:512112512112512933822Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, permease component: POPT family5e-0756.6
NC_008391:2404443:241974224197422420722981Burkholderia cepacia AMMD chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component6e-0756.2
NC_000854:191705:196677196677197462786Aeropyrum pernix K1, complete genomemolybdate ABC transporter, permease protein ModB9e-0755.5
NC_007948:4620661:461975146197514620668918Polaromonas sp. JS666, complete genomebinding-protein-dependent transport systems inner membrane component9e-0755.5
NC_011566:4309151:4310182431018243118131632Shewanella piezotolerans WP3, complete genomeBinding-protein-dependent transport systems inner membrane component9e-0755.5
NC_021182:966839:972998972998973828831Clostridium pasteurianum BC1, complete genomeABC-type sugar transport system, permease component1e-0655.5
NC_008278:4023918:403768240376824038419738Frankia alni ACN14a, complete genomeputative sugar transport protein (ABC superfamily, membrane)1e-0655.1
NC_007005:2686551:271080027108002711594795Pseudomonas syringae pv. syringae B728a, complete genomeBinding-protein-dependent transport systems inner membrane component2e-0654.7
NC_013172:542896:5533635533635551261764Brachybacterium faecium DSM 4810, complete genomeABC-type Fe3+ transport system, permease component2e-0654.3
NC_008686:405159:439692439692440477786Paracoccus denitrificans PD1222 chromosome 1, complete sequencebinding-protein-dependent transport systems inner membrane component3e-0653.9
NC_015634:526889:545328545328546155828Bacillus coagulans 2-6 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-0653.9
NC_011894:3820000:382239138223913823125735Methylobacterium nodulans ORS 2060, complete genomemolybdate ABC transporter, inner membrane subunit4e-0653.1
NC_010067:892729:9039379039379056431707Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-0653.1
NC_009831:1255995:126001312600131260918906Shewanella sediminis HAW-EB3, complete genomebinding-protein-dependent transport systems inner membrane component6e-0652.8
NC_018681:6977670:699502569950256995924900Nocardia brasiliensis ATCC 700358 chromosome, complete genome2-aminoethylphosphonate transport system permease PhnU8e-0652.4