Pre_GI: BLASTP Hits

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Query: NC_012917:2921932:2930737 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2930737, End: 2931477, Length: 741

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:1970686:198484119848411985590750Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-136484
NC_015138:4905935:491681749168174917551735Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completetype 12 methyltransferase1e-36152
NC_002939:3303989:331187933118793312637759Geobacter sulfurreducens PCA, complete genomehypothetical protein2e-32139
NC_017277:352263:363433363433364218786Synechocystis sp. PCC 6803, complete genomehypothetical protein8e-21100
NC_017052:352251:363421363421364206786Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein8e-21100
NC_017039:352263:363433363433364218786Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein8e-21100
NC_000911:352263:363433363433364218786Synechocystis sp. PCC 6803, complete genomehypothetical protein8e-21100
NC_007796:3379614:339194733919473392687741Methanospirillum hungatei JF-1, complete genomeMethyltransferase type 121e-1893.6
NC_012881:4023895:403086340308634031588726Desulfovibrio salexigens DSM 2638, complete genomeMethyltransferase type 122e-1893.2
NC_007575:192095:195165195165195890726Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein9e-1787.4
NC_016112:3103716:313481531348153135546732Methylomicrobium alcaliphilum chromosome, complete genomehypothetical protein2e-1272.8
NC_009483:3544333:355358235535823554580999Geobacter uraniireducens Rf4 chromosome, complete genometype 12 methyltransferase1e-0860.1
NC_003552:4637764:4648379464837946504032025Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-0756.2
NC_009512:4408325:4420626442062644251554530Pseudomonas putida F1, complete genomeglycosyl transferase, family 22e-0756.2
NC_009523:5522447:553161255316125532523912Roseiflexus sp. RS-1 chromosome, complete genometype 11 methyltransferase3e-0652.4