Pre_GI: BLASTP Hits

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Query: NC_012917:2641000:2655832 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2655832, End: 2655954, Length: 123

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:5217000:5239111523911152409611851Enterobacter aerogenes EA1509E, complete genomeFIG00731669: hypothetical protein4e-1063.5
NC_012731:2083650:2102675210267521046451971Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative site-specific DNA methylase6e-1062.8
NC_009648:1541699:1557676155767615595351860Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative site-specific DNA methylase5e-0959.7
NC_016816:1970189:1975893197589319779712079Pantoea ananatis LMG 5342, complete genomeC-5 cytosine-specific DNA methylase1e-0858.9
NC_017297:2531750:2560278256027825617081431Clostridium botulinum F str. 230613 chromosome, complete genomeC-5 cytosine-specific DNA methylase1e-0858.5
NC_009699:2552195:2560139256013925615691431Clostridium botulinum F str. Langeland chromosome, complete genomeC-5 cytosine-specific DNA methylase1e-0858.5
NC_014837:2354241:2368175236817523699291755Pantoea sp. At-9b chromosome, complete genomeC-5 cytosine-specific DNA methylase1e-0858.2
NC_015690:1186545:1203559120355912047491191Paenibacillus mucilaginosus KNP414 chromosome, complete genomeC-5 cytosine-specific DNA methylase2e-0857.8
NC_012914:1851102:1875205187520518768811677Paenibacillus sp. JDR-2, complete genomeC-5 cytosine-specific DNA methylase2e-0857.8
NC_011283:2836000:2905357290535729069281572Klebsiella pneumoniae 342 chromosome, complete genomeDNA modification methylase4e-0857
NC_014551:576000:5869135869135882891377Bacillus amyloliquefaciens DSM 7, complete genomeC-5 cytosine-specific DNA methylase2e-0754.3
NC_020272:1311932:1329388132938813307641377Bacillus amyloliquefaciens IT-45, complete genomeC-5 cytosine-specific DNA methylase2e-0754.3