Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:1840172:1854899 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1854899, End: 1855315, Length: 417

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:1090000:110376511037651104169405Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-40164
NC_009436:3117661:314076231407623141148387Enterobacter sp. 638, complete genomehypothetical protein5e-28122
NC_011741:4570498:458573545857354586121387Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-27122
CU928160:4570498:458573545857354586121387Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein1e-27122
NC_016816:1545354:155497415549741555378405Pantoea ananatis LMG 5342, complete genomehypothetical protein3e-27120
NC_010067:191190:204775204775205179405Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-27120
NC_004547:1174650:119183911918391192258420Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-24111
NC_009524:1369395:137739913773991377815417Psychrobacter sp. PRwf-1 chromosome, complete genomehypothetical protein7e-23105
NC_013421:1819036:185362218536221854020399Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-22105
NC_013941:3300000:333160233316023332000399Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-21102
NC_002695:3468873:349387034938703494268399Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-21102
NC_011283:4438500:445920544592054459609405Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-1995.1
NC_020829:636773:646604646604647044441Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-1478.6
NC_014752:834616:847842847842848252411Neisseria lactamica ST-640, complete genomehypothetical protein2e-1477.8
NC_014640:6815264:683657368365736837007435Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein2e-1374.3
NC_003919:3396136:340610134061013406553453Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-1374.3
NC_012880:3421500:343493134349313435314384Dickeya dadantii Ech703, complete genomehypothetical protein3e-1373.6
NC_011663:674069:681365681365681892528Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-1168.6
NC_009665:639914:647204647204647731528Shewanella baltica OS185 chromosome, complete genomehypothetical protein1e-1168.6
NC_009792:3665369:368553836855383685936399Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1168.2
NC_015726:406450:418952418952419422471Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein8e-1062.4
NC_013008:3525428:355283135528313553052222Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-0962
NC_011353:3573641:359810635981063598327222Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-0962
NC_002655:3538656:356115435611543561375222Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-0962
NC_010322:583842:594321594321594785465Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein1e-0961.6
NC_015563:2018038:202842220284222028880459Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein3e-0960.8
NC_014394:2577949:259302525930252593450426Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein8e-0959.3