Pre_GI: BLASTP Hits

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Query: NC_012917:1506083:1540537 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1540537, End: 1542660, Length: 2124

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:3279499:3277367327736732795022136Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF940 membrane lipoprotein putative01335
NC_008570:3220539:3227224322722432292752052Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeYjbH0842
NC_016818:3887000:3910763391076339128562094Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative lipoprotein0701
NC_017047:3936624:3961790396179039638832094Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein0699
NC_015061:3840463:3900115390011539022082094Rahnella sp. Y9602 chromosome, complete genomehypothetical protein0698
NC_009654:866124:8661248661248683372214Marinomonas sp. MWYL1, complete genomeprotein of unknown function DUF940 membrane lipoprotein putative5e-174611
NC_008228:3841897:3845545384554538476742130Pseudoalteromonas atlantica T6c, complete genomeprotein of unknown function DUF940, membrane lipoprotein putative1e-173610
NC_016602:103878:1455811455811478362256Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceWbfB-like protein2e-173609
NC_011663:1709003:1743937174393717463062370Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-173609
NC_008321:1523323:1552740155274015551032364Shewanella sp. MR-4, complete genomeprotein of unknown function DUF940, membrane lipoprotein putative2e-172606
NC_015497:1287877:1328279132827913304202142Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein6e-172604
NC_008322:1595500:1624150162415016265132364Shewanella sp. MR-7, complete genomeprotein of unknown function DUF940, membrane lipoprotein putative2e-171602
NC_015633:461143:4589364589364611462211Vibrio anguillarum 775 chromosome chromosome I, complete sequenceWbfB4e-169595
NC_008750:1659095:1675547167554716779132367Shewanella sp. W3-18-1, complete genomeprotein of unknown function DUF940, membrane lipoprotein putative4e-167588
NC_009783:649500:6674906674906696522163Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein3e-158559
NC_007492:4310828:4330956433095643330342079Pseudomonas fluorescens PfO-1, complete genomeProtein of unknown function DUF9403e-153542
NC_016147:1435000:1450226145022614524332208Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein1e-142507
NC_014931:5088125:5088886508888650919303045Variovorax paradoxus EPS chromosome, complete genomeprotein of unknown function DUF940 membrane lipoprotein6e-133475
NC_012791:2052923:2077486207748620804582973Variovorax paradoxus S110 chromosome 1, complete genomeprotein of unknown function DUF940 membrane lipoprotein putative3e-128459
NC_014394:1373602:1400546140054614041933648Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein7e-118425
NC_005085:786851:7966497966497995102862Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein4e-40166
NC_009614:3081190:308542130854213086230810Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein9e-0756.2