Pre_GI: BLASTP Hits

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Query: NC_012854:1:13365 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505,

Start: 13365, End: 14933, Length: 1569

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014152:421481:4401874401874418271641Thermincola sp. JR, complete genomehypothetical protein1e-54214
NC_014314:1148000:1159357115935711609131557Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein5e-45182
NC_010337:616304:6425506425506441301581Heliobacterium modesticaldum Ice1, complete genomehypothetical protein1e-44181
NC_014364:2111685:2123295212329521248361542Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehypothetical protein2e-44181
NC_014734:677103:6933416933416948941554Paludibacter propionicigenes WB4 chromosome, complete genomehypothetical protein2e-43177
NC_015577:3244857:3255981325598132575491569Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein5e-36152
NC_012854:1:1174911749133441596Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505,hypothetical protein3e-23110
NC_012918:356019:3676653676653691371473Geobacter sp. M21 chromosome, complete genomehypothetical protein4e-2099.8
NC_014836:2620871:2639847263984726417451899Desulfurispirillum indicum S5 chromosome, complete genomeHeat shock protein Hsp90-like protein2e-0964.7
NC_004342:1213202:1233279123327912350901812Leptospira interrogans serovar Lai str. 56601 chromosome I,Heat shock protein htpG4e-0860.1
NC_002939:2617037:2620678262067826226301953Geobacter sulfurreducens PCA, complete genomeheat shock protein 902e-0757.8
NC_003919:2956404:2960605296060529625091905Xanthomonas axonopodis pv. citri str. 306, complete genomeheat shock protein 906e-0756.2
NC_010572:802269:8022698022698041851917Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative Hsp90-family heat shock protein1e-0655.5
NC_012808:806432:8245008245008263801881Methylobacterium extorquens AM1, complete genomechaperone Hsp90, heat shock protein C 62.51e-0655.1
NC_010172:1079127:1119602111960211214821881Methylobacterium extorquens PA1, complete genomeheat shock protein Hsp901e-0655.1
NC_011757:1146608:1166013116601311678931881Methylobacterium chloromethanicum CM4, complete genomeheat shock protein Hsp901e-0655.1
NC_010725:1003760:1022200102220010240801881Methylobacterium populi BJ001, complete genomeheat shock protein Hsp902e-0654.7
NC_007508:3065621:3069821306982130717251905Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeheat shock protein 902e-0654.7
NC_013510:517878:5565605565605583561797Thermomonospora curvata DSM 43183, complete genomeATP-binding region ATPase domain protein6e-0652.8