Pre_GI: BLASTP Hits

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Query: NC_012850:459315:471455 Rhizobium leguminosarum bv. trifolii WSM1325, complete genome

Start: 471455, End: 472354, Length: 900

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015318:981989:9994109994101000366957Hippea maritima DSM 10411 chromosome, complete genomefamily 2 glycosyl transferase1e-1067.4
NC_013769:914000:933869933869934831963Sulfolobus islandicus L.D.8.5 chromosome, complete genomefamily 2 glycosyl transferase3e-1066.2
NC_011992:571000:5796795796795815291851Acidovorax ebreus TPSY, complete genomeglycosyl transferase family 25e-1065.1
NC_008740:1815743:182511118251111826010900Marinobacter aquaeolei VT8, complete genomeglycosyl transferase, family 28e-1064.7
NC_011883:1182000:1182490118249011849282439Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,glycosyl transferase group 12e-0963.2
NC_014376:3732547:3745018374501837465321515Clostridium saccharolyticum WM1 chromosome, complete genomeglycosyl transferase family 22e-0963.2
NC_018678:3953809:3965728396572839685052778Alteromonas macleodii str. 'English Channel 673' chromosome,family 2 glycosyl transferase3e-0962.8
NC_010511:5424004:5445386544538654464021017Methylobacterium sp. 4-46 chromosome, complete genomeglycosyl transferase family protein5e-0962
NC_009523:4222696:4222696422269642247352040Roseiflexus sp. RS-1 chromosome, complete genomeglycosyl transferase family protein7e-0961.6
NC_014976:1:4263426356361374Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein6e-0961.6
NC_014479:2038348:2051689205168920530621374Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein9e-0961.2
NC_003552:2674385:2676934267693426779861053Methanosarcina acetivorans C2A, complete genomeglycosyltransferase1e-0860.8
NC_010424:1778459:1789014178901417900241011Candidatus Desulforudis audaxviator MP104C, complete genomeglycosyl transferase, family 22e-0860.5
NC_014915:3259440:327034232703423271250909Geobacillus sp. Y412MC52 chromosome, complete genomeglycosyl transferase family 22e-0859.7
NC_013411:3251500:326437332643733265281909Geobacillus sp. Y412MC61, complete genomeglycosyl transferase family 22e-0859.7
NC_008781:3365468:338266833826683383468801Polaromonas naphthalenivorans CJ2, complete genomeglycosyl transferase, family 24e-0859.3
NC_002939:3303989:3320350332035033275557206Geobacter sulfurreducens PCA, complete genomeglycosyl transferase, group 1/2 family protein3e-0859.3
NC_009348:1475955:1501029150102915043403312Aeromonas salmonicida subsp. salmonicida A449, complete genomeglycosyl transferase, group 2 family protein4e-0858.9
NC_008553:1038344:104664510466451047553909Methanosaeta thermophila PT, complete genomeglycosyl transferase, family 24e-0858.9
NC_016051:1429800:144903414490341449945912Thermococcus sp. AM4 chromosome, complete genomeglycosyl transferase family protein4e-0858.9
NC_013156:471978:492928492928493815888Methanocaldococcus fervens AG86, complete genomeglycosyl transferase family 25e-0858.5
NC_019974:2541880:255782225578222558796975Natronococcus occultus SP4, complete genomeglycosyl transferase6e-0858.5
NC_013411:3251500:3265256326525632666231368Geobacillus sp. Y412MC61, complete genomeglycosyl transferase family 26e-0858.5
NC_014915:3259440:3271225327122532725921368Geobacillus sp. Y412MC52 chromosome, complete genomeglycosyl transferase family 26e-0858.5
NC_009483:4434375:4434375443437544353881014Geobacter uraniireducens Rf4 chromosome, complete genomeglycosyl transferase family protein7e-0858.2
NC_018876:2305659:2332099233209923331511053Methanolobus psychrophilus R15 chromosome, complete genomeglycosyltransferase7e-0858.2
NC_003364:225500:2287882287882298851098Pyrobaculum aerophilum str. IM2, complete genomeglycosyl transferase, putative1e-0757.8
NC_011832:2306341:232336623233662324265900Candidatus Methanosphaerula palustris E1-9c, complete genomeglycosyl transferase family 21e-0757.4
NC_012804:2017531:203467920346792035593915Thermococcus gammatolerans EJ3, complete genomeGlycosyltransferase, family 22e-0757
NC_011979:1590432:160819716081971609042846Geobacter sp. FRC-32, complete genomeglycosyl transferase family 24e-0755.5
NC_013740:660880:672220672220673170951Acidaminococcus fermentans DSM 20731, complete genomeglycosyl transferase family 25e-0755.5
NC_013530:2819569:2832497283249728356133117Xylanimonas cellulosilytica DSM 15894, complete genomeglycosyl transferase family 25e-0755.5
NC_015571:411156:4261744261744272141041Porphyromonas gingivalis TDC60, complete genomeputative glycosyl transferase family 27e-0755.1
NC_011901:2466360:2504641250464125057801140Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completefamily 2 glycosyl transferase6e-0755.1
NC_016948:3381848:340227234022723403057786Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein7e-0754.7
NC_007519:2847816:2865413286541328665461134Desulfovibrio alaskensis G20 chromosome, complete genomecell wall biosynthesis glycosyltransferase-like protein9e-0754.3
NC_014150:137315:1501691501691516111443Brachyspira murdochii DSM 12563 chromosome, complete genomeglycosyl transferase family 29e-0754.3
NC_015554:2355379:237177323717732372651879Alteromonas sp. SN2 chromosome, complete genomedolichyl-phosphate mannose synthase-like protein1e-0654.3
NC_018679:1858448:186498718649871865967981Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completedolichyl-phosphate mannose synthase-like protein1e-0653.9
NC_007517:2241104:225401022540102254921912Geobacter metallireducens GS-15, complete genomeGlycosyl transferase, family 21e-0653.9
NC_015145:4191745:4198427419842741995001074Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeglycosyl transferase2e-0653.5
NC_011894:7109374:7110027711002771122102184Methylobacterium nodulans ORS 2060, complete genomeglycosyl transferase family 22e-0653.5
NC_000868:1107639:111283411128341113730897Pyrococcus abyssi GE5, complete genomeglycosyl transferase2e-0653.5
NC_020304:3751710:376505837650583765966909Desulfocapsa sulfexigens DSM 10523, complete genomeglycosyl transferase2e-0653.1
NC_009620:1307932:1321175132117513222961122Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceglycosyl transferase family protein2e-0653.1
NC_014150:137315:1516041516041526411038Brachyspira murdochii DSM 12563 chromosome, complete genomeglycosyl transferase family 22e-0653.1
NC_008609:3011059:3019952301995230209741023Pelobacter propionicus DSM 2379, complete genomeglycosyl transferase, family 23e-0652.8
NC_016609:8271000:828534682853468286308963Niastella koreensis GR20-10 chromosome, complete genomefamily 2 glycosyl transferase3e-0652.8
NC_007645:5397526:541275854127585413645888Hahella chejuensis KCTC 2396, complete genomeGlycosyltransferase involved in cell wall biogenesis3e-0652.8
NC_013173:3679326:371584737158473716770924Desulfomicrobium baculatum DSM 4028, complete genomeglycosyl transferase family 23e-0652.8
NC_015556:4543380:456397945639794564887909Pseudomonas fulva 12-X chromosome, complete genomeglycosyl transferase family 23e-0652.8
NC_016935:634500:655314655314656294981Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-0652.4
NC_014098:850000:8652758652758672151941Bacillus tusciae DSM 2912 chromosome, complete genomeglycosyl transferase family 24e-0652.4
NC_014364:667841:6964946964946997963303Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeglycosyl transferase family 25e-0652
NC_016947:3309898:333033033303303331127798Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein6e-0652
NC_009725:3602632:362324136232413624011771Bacillus amyloliquefaciens FZB42, complete genomeSpsA8e-0651.6
NC_011420:852643:866984866984867979996Rhodospirillum centenum SW, complete genomeglycosyl transferase, family 2, putative7e-0651.6
NC_012778:263241:2787122787122798031092Eubacterium eligens ATCC 27750, complete genomehypothetical protein6e-0651.6
NC_009523:5104413:5125245512524551283433099Roseiflexus sp. RS-1 chromosome, complete genomeglycosyl transferase family protein6e-0651.6
NC_003450:359759:3758423758423768791038Corynebacterium glutamicum ATCC 13032, complete genomecell wall biogenesis glycosyltransferase6e-0651.6
NC_006958:359760:3758433758433768801038Corynebacterium glutamicum ATCC 13032, complete genomePUTATIVE GLYCOSYLTRANSFERASE6e-0651.6
NC_013769:914000:927916927916928848933Sulfolobus islandicus L.D.8.5 chromosome, complete genomefamily 2 glycosyl transferase6e-0651.6
NC_002977:652481:6578176578176588421026Methylococcus capsulatus str. Bath, complete genomeglycosyl transferase, group 2 family protein8e-0651.2
NC_009800:3821824:3821824382182438228581035Escherichia coli HS, complete genomeglycosyl transferase, group 2 family protein8e-0651.2
NC_019974:2889375:290142829014282902366939Natronococcus occultus SP4, complete genomeglycosyl transferase9e-0651.2
NC_011769:3401353:3416110341611034178641755Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeglycosyl transferase family 29e-0651.2