Pre_GI: BLASTP Hits

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Query: NC_012808:3972983:3988447 Methylobacterium extorquens AM1, complete genome

Start: 3988447, End: 3988989, Length: 543

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008343:88184:101901101901102548648Granulibacter bethesdensis CGDNIH1, complete genomeprotein yciF2e-54211
NC_011386:931140:959542959542960039498Oligotropha carboxidovorans OM5, complete genomeprotein YciF3e-38157
NC_015684:3157941:316441731644173164914498Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein3e-38157
NC_010581:3387118:339239233923923392886495Beijerinckia indica subsp. indica ATCC 9039, complete genomeprotein of unknown function DUF8926e-37153
NC_009668:1726000:172610617261061726609504Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein3e-36150
NC_009441:3155500:316161131616113162264654Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein8e-28123
NC_011894:4934304:493730049373004937803504Methylobacterium nodulans ORS 2060, complete genomeprotein of unknown function DUF8921e-27122
NC_002655:2264773:227038722703872270887501Escherichia coli O157:H7 EDL933, complete genomeputative structural proteins2e-27121
AP010958:1472506:149216514921651492665501Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein2e-27121
NC_013008:1761165:178228017822801782780501Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-27121
NC_013353:1472506:149216514921651492665501Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-27121
NC_013361:1754346:177541917754191775919501Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-27121
NC_010473:1384000:140269014026901403190501Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein2e-27121
NC_011353:1761977:178330417833041783825522Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeYciF protein2e-27121
NC_013941:1613595:162837116283711628892522Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeYciF protein2e-27121
NC_011283:3379181:338208033820803382574495Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein5e-26117
NC_013850:3340882:334088233408823341376495Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF8925e-26117
NC_009425:63709:741667416674642477Enterobacter sp. 638 plasmid pENTE01, complete sequencehypothetical protein7e-26116
NC_014834:2206119:221176922117692212278510Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein1e-23109
NC_015666:2721350:273513127351312735625495Halopiger xanaduensis SH-6 chromosome, complete genomehypothetical protein7e-21100
NC_019962:217798:234708234708235196489Natrinema pellirubrum DSM 15624, complete genomehypothetical protein2e-1892
NC_017249:4398000:442027744202774420819543Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-1580.5
NC_013743:3681235:368704936870493687513465Haloterrigena turkmenica DSM 5511, complete genomeprotein of unknown function DUF8922e-1479
NC_008025:2407618:241747524174752417960486Deinococcus geothermalis DSM 11300, complete genomeprotein of unknown function DUF8922e-1375.5
NC_017080:942416:946839946839947354516Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein1e-0652.4